DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamtsl4

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_038958286.1 Gene:Adamtsl4 / 310670 RGDID:1561012 Length:1035 Species:Rattus norvegicus


Alignment Length:1224 Identity:237/1224 - (19%)
Similarity:341/1224 - (27%) Gaps:470/1224 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 EEAPEFKLVHLAQQRPEEQQRLEER-----KRPGEAEQHGGNPHQRRQRR-------SLPSEDGN 136
            :|....:|:..:.|.|.|:.::.|.     .|.....|..|...|||.|.       |||     
  Rat    25 QEVSPGQLLGPSLQTPSEEDQVPEGLWGPWGRWASCSQPCGVGVQRRSRTCELHPALSLP----- 84

  Fly   137 GPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRRTENGTQFVEHSPQLLKRLERCFYRSPA 201
             |.||...|........:|.|..:.||.:                  :.||  .|......|.||
  Rat    85 -PRPPRHPEAPQPRGQGSRPQTPRDPQSL------------------YRPQ--PRGRGGPLRGPA 128

  Fly   202 AALDLCEPGNVRGVFQQNGSDLVIHPL-PARFGTG----THVLYQAR--VDKSGGGYSEASSRRT 259
            :.:...|....||..:....|    |: |..||.|    ...|:::|  ..|.|.....:::..|
  Rat   129 SQVGREETQEPRGAQRFRVRD----PIKPGMFGYGRVPFALPLHRSRRLAHKPGQPKDSSTAEET 189

  Fly   260 ASPLDSQLQFEPDAEEFNEPRRR---LRAQSQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPR 321
               |.||......|.|.:.|..:   |||||:         .|....|.....|.      :.| 
  Rat   190 ---LPSQPPSTEPASEKHSPHMQPPELRAQSR---------SPSAETPRSGTAQT------EVP- 235

  Fly   322 SRWSDIPEELFI--ETAIFVDS-DLYAHMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRI 383
            ||.|..|.::.|  .|:.|.|| ......:...||:..::......:.:...||...|       
  Rat   236 SRTSSAPSDMGIPAPTSSFRDSRSFQGSPEPRMPTSQGAERQPHPFSPVTRSQLSRRH------- 293

  Fly   384 NFVLKRLEIWKSWDPPG---------LVRSRDVENYLNSF--------CKWQ-EKLN-------P 423
                        |.|||         |..:||...:.:.|        |..: |::.       |
  Rat   294 ------------WRPPGSPHRSPDGWLPLTRDSSPHWSLFAPSSPTPECSGESEQMRACSQEPCP 346

  Fly   424 FSDADPLHYDHALVLTGLDLVTYDKGKANSQVV---GMATVKGMCTSIYSCTINEAKHFESVFVV 485
            ....||         ..|....:|..:...|:.   ....|:|.    ..|.:|           
  Rat   347 PEQPDP---------RALQCAAFDSQEFMGQLYQWEPFTEVQGS----QRCELN----------- 387

  Fly   486 AHEIGHNLGMRHDAK---EISCDP-------TMHIMSPK----LGSG------------------ 518
            ....|....:||..|   ...|.|       ..|.:||.    ||||                  
  Rat   388 CRPRGFRFYVRHTEKVQDGTLCQPGSLDICVAGHCLSPGCDGILGSGRRPDGCGVCGGDGSTCRL 452

  Fly   519 ---------------KVTWSKCSRTYLEDFLMDPQAECLF-----DRDSFAGPW------DHTAG 557
                           |:.|.....::|......|.:..|.     .|....|.|      .:.|.
  Rat   453 VSGNLTDRGGPLGYQKILWIPAGASHLRISQFRPSSNYLALRGPGGRSIINGNWAVDPPGSYAAV 517

  Fly   558 G------RLP-----GERFNAN------QQCMLRFGKN----FMQASTQSKMEICRDLHCRQDGL 601
            |      |.|     ||..:|.      ....:.|.::    |.|..|.:..|           .
  Rat   518 GTVFQYNRPPREEGKGETLSAEGPTTQPVDVYMIFQEDNPGVFYQYVTSAAPE-----------S 571

  Fly   602 PWTSHPALE----------------------GT-------------------------------- 612
            |.|..|||:                      ||                                
  Rat   572 PSTMPPALQLQPEMLRGEPLLPSAPRPVRAPGTLQRQARIPQVPPPTHVRTAMGSSAGYWKQVGH 636

  Fly   613 -----ECGPNMWCRGGTCEARSSKQ---GSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDY 669
                 .||..:|.....|.:|.|.:   ....|:.:.||.. ||:.|.                 
  Rat   637 SECSASCGKGVWRPIFLCVSRESGEELDEQSCAVGARPPAS-PESCHR----------------- 683

  Fly   670 NPMDNELPGSPSNW--GEWSEPSACESGCLYG-QSRRLL---EGSTGLRTLNRSCLNFPSRCIGR 728
                   |..|..|  |||   ::|...|..| |.|:||   |...|..::.      |.|    
  Rat   684 -------PPCPPYWEAGEW---TSCSRSCGPGTQHRQLLCRQEFGGGGSSVP------PER---- 728

  Fly   729 DRRFVTCNTPQCHKVPVQTINDFATQVCMQARKSDPELTGEGQQLPSTLDASCKIFCRTRTNGTK 793
                       |..:|...|    ||.|........|::....|        |.:.|   ..|.:
  Rat   729 -----------CGHLPRPNI----TQSCQLRLCGHWEISSPWSQ--------CSVRC---GRGQR 767

  Fly   794 SRRWTFPDGTTCKAKQHNPEDITYCISG--------RCERFSCDNSTSNFFKMDSSFCEARSVRP 850
            ||:      ..|.....:......|.||        .|:...|  :|:.|:...||.|.|     
  Rat   768 SRQ------VRCVGSNGHEVGKQECASGPPPPPSREACDMGPC--TTAWFYSDWSSKCSA----- 819

  Fly   851 TRDSSDQESRQQTNRQRYAERQEGKPQKNHYENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPP 915
              :......|:.....|..|..:|.|:....|          ||..:.:                
  Rat   820 --ECGTGIQRRAVVCLRSGETLQGDPEAGSTE----------QGCPLRS---------------- 856

  Fly   916 EIPRPPPPASASLIALDRSSSSESEWVAHPGCHSNCMTD-SKGVQG----VTSRL---TGVESIQ 972
               |||...:.||      ...|..|..:.|..|.|.:: ..|.|.    ..|:|   ..|.|..
  Rat   857 ---RPPDMRACSL------GPCEKTWRWYTGPWSECSSECGSGTQHRDIICVSKLGTKFNVTSPS 912

  Fly   973 LCSY-----RIQPCERLQTAAEYAEQTCARYRQKVRGLSGHGAQISASIDEP-DRSCRVGCQD-- 1029
            .||:     .:|||:         .|.|.             .|..:::..| .:||:.|.|.  
  Rat   913 NCSHLPRPPALQPCQ---------GQACE-------------DQWFSTLWSPCSQSCQGGVQTRE 955

  Fly  1030 -EFIKYRYYLVNGRNGHFPPGTRCSPVGKRYCVYGRCLEFGDDDLPLDKTHISL 1082
             :.:...:.|    :...||..|  |..||.|....|.:..||.......|..|
  Rat   956 VQCLSSNHTL----SSRCPPHLR--PSRKRPCNSQPCNQRPDDQCKDSSPHCPL 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 19/88 (22%)
ZnMc_ADAMTS_like 331..543 CDD:239801 47/289 (16%)
Reprolysin 332..545 CDD:279729 48/295 (16%)
TSP1 683..741 CDD:214559 15/63 (24%)
Adamtsl4XP_038958286.1 PHA03247 <24..358 CDD:223021 87/409 (21%)
ADAM_spacer1 451..564 CDD:368694 18/112 (16%)
TSP1_ADAMTS 637..686 CDD:408800 13/73 (18%)
TSP1_ADAMTS 690..746 CDD:408800 21/83 (25%)
TSP1_ADAMTS 754..804 CDD:408800 11/66 (17%)
TSP1_ADAMTS 808..869 CDD:408800 18/102 (18%)
TSP1_ADAMTS 875..931 CDD:408800 15/64 (23%)
TSP1_ADAMTS 935..986 CDD:408800 13/56 (23%)
PLAC 994..1023 CDD:400844 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13723
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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