DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamtsl4

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_038958286.1 Gene:Adamtsl4 / 310670 RGDID:1561012 Length:1035 Species:Rattus norvegicus


Alignment Length:1224 Identity:237/1224 - (19%)
Similarity:341/1224 - (27%) Gaps:470/1224 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 EEAPEFKLVHLAQQRPEEQQRLEER-----KRPGEAEQHGGNPHQRRQRR-------SLPSEDGN 136
            :|....:|:..:.|.|.|:.::.|.     .|.....|..|...|||.|.       |||     
  Rat    25 QEVSPGQLLGPSLQTPSEEDQVPEGLWGPWGRWASCSQPCGVGVQRRSRTCELHPALSLP----- 84

  Fly   137 GPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRRTENGTQFVEHSPQLLKRLERCFYRSPA 201
             |.||...|........:|.|..:.||.:                  :.||  .|......|.||
  Rat    85 -PRPPRHPEAPQPRGQGSRPQTPRDPQSL------------------YRPQ--PRGRGGPLRGPA 128

  Fly   202 AALDLCEPGNVRGVFQQNGSDLVIHPL-PARFGTG----THVLYQAR--VDKSGGGYSEASSRRT 259
            :.:...|....||..:....|    |: |..||.|    ...|:::|  ..|.|.....:::..|
  Rat   129 SQVGREETQEPRGAQRFRVRD----PIKPGMFGYGRVPFALPLHRSRRLAHKPGQPKDSSTAEET 189

  Fly   260 ASPLDSQLQFEPDAEEFNEPRRR---LRAQSQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPR 321
               |.||......|.|.:.|..:   |||||:         .|....|.....|.      :.| 
  Rat   190 ---LPSQPPSTEPASEKHSPHMQPPELRAQSR---------SPSAETPRSGTAQT------EVP- 235

  Fly   322 SRWSDIPEELFI--ETAIFVDS-DLYAHMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRI 383
            ||.|..|.::.|  .|:.|.|| ......:...||:..::......:.:...||...|       
  Rat   236 SRTSSAPSDMGIPAPTSSFRDSRSFQGSPEPRMPTSQGAERQPHPFSPVTRSQLSRRH------- 293

  Fly   384 NFVLKRLEIWKSWDPPG---------LVRSRDVENYLNSF--------CKWQ-EKLN-------P 423
                        |.|||         |..:||...:.:.|        |..: |::.       |
  Rat   294 ------------WRPPGSPHRSPDGWLPLTRDSSPHWSLFAPSSPTPECSGESEQMRACSQEPCP 346

  Fly   424 FSDADPLHYDHALVLTGLDLVTYDKGKANSQVV---GMATVKGMCTSIYSCTINEAKHFESVFVV 485
            ....||         ..|....:|..:...|:.   ....|:|.    ..|.:|           
  Rat   347 PEQPDP---------RALQCAAFDSQEFMGQLYQWEPFTEVQGS----QRCELN----------- 387

  Fly   486 AHEIGHNLGMRHDAK---EISCDP-------TMHIMSPK----LGSG------------------ 518
            ....|....:||..|   ...|.|       ..|.:||.    ||||                  
  Rat   388 CRPRGFRFYVRHTEKVQDGTLCQPGSLDICVAGHCLSPGCDGILGSGRRPDGCGVCGGDGSTCRL 452

  Fly   519 ---------------KVTWSKCSRTYLEDFLMDPQAECLF-----DRDSFAGPW------DHTAG 557
                           |:.|.....::|......|.:..|.     .|....|.|      .:.|.
  Rat   453 VSGNLTDRGGPLGYQKILWIPAGASHLRISQFRPSSNYLALRGPGGRSIINGNWAVDPPGSYAAV 517

  Fly   558 G------RLP-----GERFNAN------QQCMLRFGKN----FMQASTQSKMEICRDLHCRQDGL 601
            |      |.|     ||..:|.      ....:.|.::    |.|..|.:..|           .
  Rat   518 GTVFQYNRPPREEGKGETLSAEGPTTQPVDVYMIFQEDNPGVFYQYVTSAAPE-----------S 571

  Fly   602 PWTSHPALE----------------------GT-------------------------------- 612
            |.|..|||:                      ||                                
  Rat   572 PSTMPPALQLQPEMLRGEPLLPSAPRPVRAPGTLQRQARIPQVPPPTHVRTAMGSSAGYWKQVGH 636

  Fly   613 -----ECGPNMWCRGGTCEARSSKQ---GSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDY 669
                 .||..:|.....|.:|.|.:   ....|:.:.||.. ||:.|.                 
  Rat   637 SECSASCGKGVWRPIFLCVSRESGEELDEQSCAVGARPPAS-PESCHR----------------- 683

  Fly   670 NPMDNELPGSPSNW--GEWSEPSACESGCLYG-QSRRLL---EGSTGLRTLNRSCLNFPSRCIGR 728
                   |..|..|  |||   ::|...|..| |.|:||   |...|..::.      |.|    
  Rat   684 -------PPCPPYWEAGEW---TSCSRSCGPGTQHRQLLCRQEFGGGGSSVP------PER---- 728

  Fly   729 DRRFVTCNTPQCHKVPVQTINDFATQVCMQARKSDPELTGEGQQLPSTLDASCKIFCRTRTNGTK 793
                       |..:|...|    ||.|........|::....|        |.:.|   ..|.:
  Rat   729 -----------CGHLPRPNI----TQSCQLRLCGHWEISSPWSQ--------CSVRC---GRGQR 767

  Fly   794 SRRWTFPDGTTCKAKQHNPEDITYCISG--------RCERFSCDNSTSNFFKMDSSFCEARSVRP 850
            ||:      ..|.....:......|.||        .|:...|  :|:.|:...||.|.|     
  Rat   768 SRQ------VRCVGSNGHEVGKQECASGPPPPPSREACDMGPC--TTAWFYSDWSSKCSA----- 819

  Fly   851 TRDSSDQESRQQTNRQRYAERQEGKPQKNHYENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPP 915
              :......|:.....|..|..:|.|:....|          ||..:.:                
  Rat   820 --ECGTGIQRRAVVCLRSGETLQGDPEAGSTE----------QGCPLRS---------------- 856

  Fly   916 EIPRPPPPASASLIALDRSSSSESEWVAHPGCHSNCMTD-SKGVQG----VTSRL---TGVESIQ 972
               |||...:.||      ...|..|..:.|..|.|.:: ..|.|.    ..|:|   ..|.|..
  Rat   857 ---RPPDMRACSL------GPCEKTWRWYTGPWSECSSECGSGTQHRDIICVSKLGTKFNVTSPS 912

  Fly   973 LCSY-----RIQPCERLQTAAEYAEQTCARYRQKVRGLSGHGAQISASIDEP-DRSCRVGCQD-- 1029
            .||:     .:|||:         .|.|.             .|..:::..| .:||:.|.|.  
  Rat   913 NCSHLPRPPALQPCQ---------GQACE-------------DQWFSTLWSPCSQSCQGGVQTRE 955

  Fly  1030 -EFIKYRYYLVNGRNGHFPPGTRCSPVGKRYCVYGRCLEFGDDDLPLDKTHISL 1082
             :.:...:.|    :...||..|  |..||.|....|.:..||.......|..|
  Rat   956 VQCLSSNHTL----SSRCPPHLR--PSRKRPCNSQPCNQRPDDQCKDSSPHCPL 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801 47/289 (16%)
ADAMTS_CR_2 561..625 CDD:465496 19/137 (14%)
TSP1 683..741 CDD:214559 15/63 (24%)
Adamtsl4XP_038958286.1 PHA03247 <24..358 CDD:223021 87/409 (21%)
ADAMTS_CR_3 356..450 CDD:437068 19/108 (18%)
ADAMTS_spacer1 452..565 CDD:461796 18/112 (16%)
TSP1_ADAMTS 637..686 CDD:465950 13/73 (18%)
TSP1_ADAMTS 690..746 CDD:465950 21/83 (25%)
TSP1_ADAMTS 754..804 CDD:465950 11/66 (17%)
TSP1_ADAMTS 808..869 CDD:465950 18/102 (18%)
TSP1_ADAMTS 875..931 CDD:465950 15/64 (23%)
TSP1_ADAMTS 935..986 CDD:465950 13/56 (23%)
PLAC 994..1023 CDD:462560 2/10 (20%)

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