DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts3

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001381638.1 Gene:Adamts3 / 305253 RGDID:1310750 Length:1203 Species:Rattus norvegicus


Alignment Length:1297 Identity:280/1297 - (21%)
Similarity:419/1297 - (32%) Gaps:455/1297 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IVLTTLWLLIGASSSSSSTSSTN----PKSVNIELRRKRSLHYNGIELDKNTLVGHLREHERALI 77
            :|..:|| ||.||.....||:..    .:.|.|:|..||...|..:......|.||...|..:..
  Rat     1 MVFLSLW-LIAASLVEVRTSADGQAGAEEMVQIDLPTKRYREYELVTPVSTNLKGHYLSHILSAN 64

  Fly    78 FGSRSPEEAPE------FKLV------HLAQQRPEEQ--------QRLEERKRPGEAEQHGGNPH 122
            ...|||.:...      |.:.      || :.||...        :..|...|||...    :|.
  Rat    65 HKKRSPRDVSSNSEQLFFNVTAFGRDFHL-RLRPNTHFIAPGAVVEWHETAPRPGNTT----DPR 124

  Fly   123 QRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRRTENGTQFVEHSPQ 187
            ..|..||  |.:|.....|                ||.|...:.|..     ...||        
  Rat   125 NSRPHRS--SSEGGWRSEP----------------LQTSCAYVGDIM-----DVPGT-------- 158

  Fly   188 LLKRLERCFYRSPAAALDLCEPGNVRGVFQQNGSDLVIHPLPARFGTGTHVLYQARVDKSGGG-- 250
                         :.|:..|:  .:.|:.:.:..:..|.||..          ..::|:..|.  
  Rat   159 -------------SVAISNCD--GLAGMIKSDNEEYFIEPLER----------GKQMDEENGRIH 198

  Fly   251 --YSEASSRRTASPLDSQLQFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQRRR 313
              |..::..|....:...:.::               :|.|:....|.....:.....:...|||
  Rat   199 IVYKRSAMERAPRDVSEDVYYK---------------ESNLEGLDDLGTVYSNIGQQLNETTRRR 248

  Fly   314 RYIGDAPRSRWSDIPEELFIETAIFVDSDLYAHMQKNFPTNTESKVVSFLLAMINGVQLLYHHPT 378
            |:.|:          .:..||..:.||..:.....|       ..|.::||.::|.|..:||..:
  Rat   249 RHAGE----------NDYNIEVLLGVDDSVVRFHGK-------EHVQNYLLTLMNIVNEIYHDES 296

  Fly   379 LGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKW---QEKLNPFSDADPLHYDHALVLTG 440
            ||..||.||.|:.:........|:...:....|.:.|:|   |:|.:| :.|:  |:|||:.||.
  Rat   297 LGVHINVVLVRMIMLGYAKSISLIERGNPSRSLENVCRWACQQQKSDP-NHAE--HHDHAIFLTR 358

  Fly   441 LDLVTYDKGKANSQVVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISC- 504
            .|.     |.|..|  |.|.|.|||..:.|||:|....|.|.||||||.||.|||.||.:...| 
  Rat   359 QDF-----GPAGMQ--GYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNRCG 416

  Fly   505 DPTM--HIMSPKLGSG--KVTWSKCS----RTYLEDFLMDPQAECLFDRDSFAGPWDHTAGGRLP 561
            |.|.  .:|:|.:.:.  :..||:||    :.|:..:      :||.| |.|...|....  .||
  Rat   417 DETAMGSVMAPLVQAAFHRYHWSRCSGQELKRYIHSY------DCLLD-DPFEHDWPKLP--ELP 472

  Fly   562 GERFNANQQCMLRFGKNFMQASTQSKMEICRDLHCRQDGLPW----TSHPALEGTECGPNMWCRG 622
            |..::.::||...||..:...:.....:.|:.|.|.....|:    ...|.|:||||....||..
  Rat   473 GINYSMDEQCRFDFGVGYKMCTAFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDGTECAAGKWCYK 537

  Fly   623 GTCEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWS 687
            |.|..:::.|..                                            ...|||.|:
  Rat   538 GHCMWKNANQQK--------------------------------------------QDGNWGSWT 558

  Fly   688 EPSACESGCLYGQSRRLLEGSTGLRTLNRSC-----LNFPSRCIGRDRRFVTCNTPQCHKVPVQT 747
            :..:|...|           .||:|...|.|     :|....|.|.:..:..|||.:|.|    .
  Rat   559 KFGSCSRTC-----------GTGVRFRTRQCNNPTPINGGQDCPGVNFEYQLCNTEECQK----H 608

  Fly   748 INDFATQVCMQARKSDPELTGEGQQLPSTLDAS---CKIFCRTRTNGTKS-RRWTFPDGTTCKAK 808
            ..||..|.|.|..........:...||.....|   |.::|:::..|..: .:....|||.|..|
  Rat   609 FEDFRAQQCQQRNSHFDYQNTKHHWLPHEHPDSKKRCHLYCQSKETGDVAYMKQLVHDGTRCSYK 673

  Fly   809 QHNPEDITYCISGRCERFSCDNST-SNFFKM---------DSSFCEARSVRPT------------ 851
              :|..|  |:.|.|.:..||... ||  |:         |:|.|  |:|:.|            
  Rat   674 --DPYSI--CVRGECVKVGCDKEIGSN--KVEDKCGVCGGDNSHC--RTVKGTFTRTPRKLGKTR 730

  Fly   852 ---------RDSSDQESRQQTNRQRYAERQEGKPQKNHY----ENEVAKRPSY---G-------- 892
                     |:.|..|:|:..|......:..|     ||    :.|.||..::   |        
  Rat   731 GAFVLPKGARNISLAETRETKNVLAIKNQATG-----HYILNGKGEEAKSRTFIDLGVEWDYNIE 790

  Fly   893 ---QGNHINAPASPYKRRNYHKPYPPEIPRPPPPASASLIAL------DRSSSSESEWVAH---- 944
               :..|.:.|        .|.|               :|.|      |..||...:::.|    
  Rat   791 DDIETLHTDGP--------LHDP---------------VIVLIIPQENDTRSSLTYKYIIHEDSV 832

  Fly   945 PGCHSN----------------------------------C--MTDSK----------------- 956
            |..:||                                  |  .:|||                 
  Rat   833 PTINSNNVIQEELDTFEWALKSWSQCSKPCGGGFQYTKYGCRRKSDSKMVHRSFCEVNKKPKPIR 897

  Fly   957 ---GVQGVTSRLTGVESIQLCS-------YRI------------------------------QPC 981
               .:|..|..|...|:.:.||       |::                              :||
  Rat   898 RMCNIQECTHPLWAAEAWEHCSRSCGSSGYQLRTVRCLQPLQDGTNRSVHSRYCLGERPESRRPC 962

  Fly   982 ERLQTAAEY-------AEQTC---ARYRQKVRGLSGH----------GAQISASIDEP---DRSC 1023
            .|:...|::       ...||   ...||.:.....|          ..|:....|||   |:| 
  Rat   963 NRIPCPAQWKTGPWNECSVTCGEGTEVRQVLCRTGDHCDGEKPESVRACQLPPCNDEPCLGDKS- 1026

  Fly  1024 RVGCQDEFIKYRYYLVNG-----------RNGHFPPGTRCSPVGKRYCVYGRCLEFGDDDLP 1074
             :.||.|.:. ||..:.|           |:|..||     |..:..........||..|||
  Rat  1027 -IFCQMEVLA-RYCSIPGYSELCCESCSKRSGTLPP-----PYLQEAAEIHSDAIFGPSDLP 1081

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801 73/223 (33%)
ADAMTS_CR_2 561..625 CDD:465496 19/67 (28%)
TSP1 683..741 CDD:214559 16/62 (26%)
Adamts3NP_001381638.1 Pep_M12B_propep 43..201 CDD:460254 37/218 (17%)
ZnMc_ADAMTS_like 256..457 CDD:239801 73/223 (33%)
ADAMTS_CR_2 472..540 CDD:465496 19/67 (28%)
TSP1 554..605 CDD:214559 16/61 (26%)
ADAMTS_CR_3 611..712 CDD:437068 28/106 (26%)
ADAMTS_spacer1 714..828 CDD:461796 23/141 (16%)
TSP1_ADAMTS 850..905 CDD:465950 5/54 (9%)
TSP1_ADAMTS 910..967 CDD:465950 7/56 (13%)
TSP1_ADAMTS 971..1016 CDD:465950 6/44 (14%)
PLAC 1024..1052 CDD:462560 8/30 (27%)

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