DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts2

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001382353.1 Gene:Adamts2 / 287899 RGDID:1565950 Length:1212 Species:Rattus norvegicus


Alignment Length:1185 Identity:267/1185 - (22%)
Similarity:400/1185 - (33%) Gaps:348/1185 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LIFGSRSPEEAPEF--KLVHLAQQRPEEQQRLEERKRPGEAEQHGGNPHQRRQRRSLPSEDGNGP 138
            |:..:.:|...|.:  :.:.....|.:.|.||.......|..:.|     .|.||:.|.:...  
  Rat    39 LVAATETPGGPPGYGAERILAVPVRTDAQGRLVSHVVSLETARAG-----VRARRAAPVQTSG-- 96

  Fly   139 LPPEEEEQEAGE--------DVEARLQLQQSPQLIDDAFIFIRRTENGTQFVEHSPQLLKRLERC 195
            ||...|:...|.        ..:..|:|:.:.:|:........:.|.|...||      ..|..|
  Rat    97 LPGGAEQDPGGRLFYNLTVFGRDLHLRLRPNARLVAPGATVEWQGETGDTRVE------PLLGTC 155

  Fly   196 FY--------RSPAAALDLCEPGNVRGVFQQNGSDLVIHPL-------PARFGTGTHVLYQARVD 245
            .|        ::.:.||..|:  .:.|:.:....:..|.||       .|..|. .||:|     
  Rat   156 LYVGDVADLPKTSSVALSNCD--GLAGLIRMEEEEFFIEPLEKGQTDQEAEQGR-VHVVY----- 212

  Fly   246 KSGGGYSEASSRRTASPLDSQLQFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQ 310
                       ||..:|....:. .|.|.:....:..|.:.|:....|..|.        ...::
  Rat   213 -----------RRPPTPKPPPVG-GPQALDTGASQGNLDSLSRALGVLEERI--------NSSRR 257

  Fly   311 RRRRYIGDAPRSRWSDIPEELFIETAIFVDSDLY-----AHMQKNFPTNTESKVVSFLLAMINGV 370
            |.||:..|          ::..||..:.||..:.     .|:||            :||.::|.|
  Rat   258 RVRRHATD----------DDYNIEVLLGVDDSVVQFHGKEHVQK------------YLLTLMNIV 300

  Fly   371 QLLYHHPTLGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKW---QEKLNPFSDADPLHY 432
            ..:||..:||..||.||.|:.:........|:...:....|.:.|:|   |:|  |.:|.|..| 
  Rat   301 NEIYHDESLGAHINVVLVRIILLSHAKSMSLIEIGNPSQSLENVCRWAYLQQK--PDTDHDEYH- 362

  Fly   433 DHALVLTGLDLVTYDKGKANSQVVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRH 497
            |||:.||..|.     |.:..|  |.|.|.|||..:.|||:|....|.|.||||||.||.|||.|
  Rat   363 DHAIFLTRQDF-----GPSGMQ--GYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEH 420

  Fly   498 DAKEISCDPTMH---IMSPKLGSG--KVTWSKCSRTYLEDFLMDPQAECLFDRDSFAGPWDHTAG 557
            |.:...|...:.   ||:|.:.:.  :..||:||:..|..:|  ...:||.| |.||..|  .|.
  Rat   421 DGQGNRCGDEVRLGSIMAPLVQAAFHRFHWSRCSQQELSRYL--HSYDCLRD-DPFAHDW--PAL 480

  Fly   558 GRLPGERFNANQQCMLRFGKNFMQASTQSKMEICRDLHCRQDGLPW----TSHPALEGTECGPNM 618
            .:|||..::.|:||...||..:|..:.....:.|:.|.|.....|:    ...|.|:||.|.|..
  Rat   481 PQLPGLHYSMNEQCRFDFGLGYMMCTAFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDGTMCAPGK 545

  Fly   619 WCRGGTCEARSSKQGSYSALKSW-PPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSN 682
            .|..|.|              .| .|:         |::.:                      .|
  Rat   546 HCFKGHC--------------IWLTPD---------ILKRD----------------------GN 565

  Fly   683 WGEWSEPSACESGCLYGQSRRLLEGSTGLRTLNRSC-----LNFPSRCIGRDRRFVTCNTPQCHK 742
            ||.|:...:|...|           .||::...|.|     .|....|.|....|..||...|  
  Rat   566 WGAWTPFGSCSRTC-----------GTGVKFRTRQCDSPHPANGGRTCSGLAYDFQLCNPQDC-- 617

  Fly   743 VPVQTINDFATQVCMQARKSDPEL---TGEGQQ--LP-STLDAS--CKIFCRTRTNG-TKSRRWT 798
              ..::.||..:.|.|.     :|   .|:.|.  || ...||.  |.::|.::..| ..|.:..
  Rat   618 --PNSLADFREEQCRQW-----DLYFEHGDAQHHWLPHEHRDAKERCHLYCESKETGEVVSMKRM 675

  Fly   799 FPDGTTCKAKQHNPEDITYCISGRCERFSCD---NSTSNFFKM-----DSSFCEARSVRPTRDSS 855
            ..|||.|..|    :..:.|:.|.|.:..||   .|.....|.     |::.|:......||...
  Rat   676 VHDGTRCSYK----DAFSLCVRGDCRKVGCDGVIGSRKQEDKCGVCGGDNTHCKVVKGTFTRSPR 736

  Fly   856 DQESRQQTN---RQRYAERQEGKPQKNH--YENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPP 915
            .|:..:...   ..|:...||.....:|  .:|....:....:.||::..:..:........|..
  Rat   737 KQDYIKMFEIPAGARHLLIQETDTTSHHLSVKNLETGKFILNEENHLDPNSRSFIAMGVEWEYRN 801

  Fly   916 EIPR------------------PPPPASASL----------IALDRSSSSESEWVAH-------P 945
            |..|                  |...|..||          :.:|.::..|.:.|.|       .
  Rat   802 EDERETLQTIGPLHGTITVLVIPEGDARISLTYKYMIHEDSLNVDDNNVLEDDSVRHEWALKKWS 866

  Fly   946 GCHSNC-------------MTDSKGV-QGVTSRLTGVESI------QLCSYRI------QPCERL 984
            .|...|             ..|||.| :...|.|...::|      |.||..:      :||   
  Rat   867 PCSKPCGGGSQFTKYGCRRRLDSKMVHRAFCSALAKPKAIRRACNPQECSQPVWVTGEWEPC--- 928

  Fly   985 QTAAEYAEQTCARYRQKVRGL------------SGHGAQISASIDEPDRSC---------RVG-- 1026
                   .|:|.|...:||.:            |.|....:....|..|:|         |.|  
  Rat   929 -------TQSCGRTGMQVRSVRCIQPLHNNTTRSVHTKHCNDHRPESRRACNRELCPGRWRAGSW 986

  Fly  1027 ---------------------------CQDEFIKYRYYLVNGRNGHFPPGTRCS--PVGKRYCVY 1062
                                       ||:|..:      ..|.....|..|.|  |..|.|.| 
  Rat   987 SQCSVTCGNGTQERPVLCRTADDNFGVCQEERPE------TARICRLAPCPRNSSDPSKKSYVV- 1044

  Fly  1063 GRCLEFGDDDLPLDK 1077
             :.|...|.|.|:.|
  Rat  1045 -QWLSRPDPDSPIQK 1058

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 20/98 (20%)
ZnMc_ADAMTS_like 331..543 CDD:239801 74/224 (33%)
Reprolysin 332..545 CDD:279729 75/225 (33%)
TSP1 683..741 CDD:214559 15/62 (24%)
Adamts2NP_001382353.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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