DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamts13

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001001322.1 Gene:Adamts13 / 279028 MGIID:2685556 Length:1426 Species:Mus musculus


Alignment Length:632 Identity:166/632 - (26%)
Similarity:248/632 - (39%) Gaps:173/632 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 SQLQSPLRLRFQPR-------HH------HPHQHHQQ-RRRRYIGDAPRSRWSDIPEELFIETAI 337
            |..|..|....:|:       ||      ||..|.|: ||||.:.|.           |.:|..:
Mouse    35 SDFQKSLLQDLEPKDVSSYFGHHAAPFTGHPPSHLQRLRRRRTLEDI-----------LHLELLV 88

  Fly   338 FVDSDL-YAHMQKNFPTNTESKVVSFLLAMIN-GVQLLYHHPTLGRRINF---VLKRLEIWKSWD 397
            .|..|: .||.:     :||    .::|..:| |.:|| .:|:||  :.|   ::|.:.:..|..
Mouse    89 AVGPDVSRAHQE-----DTE----RYVLTNLNIGSELL-RNPSLG--VQFQVHLVKLITLSDSES 141

  Fly   398 PPGLVRSRDVENYLNSFCKWQEKLNPFSDADPLHYDHALVLTGLDLVTYDKGKANSQVVGMATVK 462
            .|.:  :.::.:.|.|.|:|.:.:||..|.||.|.|..|.:|..||...|   .|.||.|:..:.
Mouse   142 TPNI--TANITSSLMSVCEWSQTINPHDDRDPSHADLILYITRFDLELPD---GNQQVRGVTQLG 201

  Fly   463 GMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEIS---CDPTMHIMSPKLGS---GKVT 521
            |.|:..:||.|.|...|:....:||||||:.|:.||....|   |..:.|:|:....:   |.:.
Mouse   202 GACSLSWSCLITEDTGFDLGVTIAHEIGHSFGLDHDGAPGSGSTCKASGHVMAADGATPTGGTLE 266

  Fly   522 WSKCSRTYLEDFLMDPQAECLFDRDSF-AGPWDHTAGGRLPGERFNANQQCMLRFGKNFMQASTQ 585
            ||.||:..|:..|...|..|..|.... :|...|....: ||..::|:.||.:.||...: |.|.
Mouse   267 WSACSQRQLQHLLSTGQMHCFQDPPGLQSGLTRHQLMAQ-PGLYYSADDQCRVAFGSGAV-ACTF 329

  Fly   586 SK--MEICRDLHCRQDGLPWTS-----HPALEGTECGPNMWCRGGTCEARSSKQGSYSALKSWPP 643
            |:  :::|:.|.|..|.|..:|     .|.|:|||||...||....|.:.:              
Mouse   330 SREGLDVCQALSCHTDPLDQSSCSRLLVPLLDGTECGVEKWCSKARCRSLA-------------- 380

  Fly   644 EHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLEGS 708
            |..|.|.               :|             .:|..|...|.|...|           .
Mouse   381 ELAPVAA---------------VH-------------GHWSSWGPHSPCSRSC-----------G 406

  Fly   709 TGLRTLNRSCLN----FPSR-CIGRDRRFVTCNTPQCHKVPVQTINDFATQVCMQARKSDPELT- 767
            .|:.|..|.|.|    |..| |:|.|.:...|||..|.|..:    :|.::.|.|..:...:|: 
Mouse   407 GGVITRRRWCNNPRPAFGGRACVGEDLQAKMCNTQACEKTQL----EFMSEQCAQTDRQPLQLSQ 467

  Fly   768 --------------GEGQQLPSTLDASCKIFC-RTRTNGTKSRRWTFPDGTTCKAKQHNPED--- 814
                          .:|       |..|:..| ....:...||...|.|||.|...  .|:|   
Mouse   468 GTASFYHWDAAVQYSQG-------DTLCRHMCWAVGESFIVSRGDRFLDGTRCVPS--GPQDDGT 523

  Fly   815 ITYCISGRCERFSCDNSTSNFFKMDS--------------SFCEARS 847
            ::.|:.|.|..|.||.      :|||              |.|.:|:
Mouse   524 LSLCLLGSCRTFGCDG------RMDSQKVWDACQVCGGDNSTCSSRN 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801 69/222 (31%)
Reprolysin 332..545 CDD:279729 68/223 (30%)
TSP1 683..741 CDD:214559 18/62 (29%)
Adamts13NP_001001322.1 ZnMc_ADAMTS_like 82..286 CDD:239801 68/220 (31%)
TSP1 392..444 CDD:214559 18/62 (29%)
Cysteine-rich 445..561 28/134 (21%)
Cell attachment site. /evidence=ECO:0000255 503..505 1/1 (100%)
Spacer 556..685 3/9 (33%)
ADAM_spacer1 565..683 CDD:283607 166/632 (26%)
TSP1 754..810 CDD:214559
TSP1 1082..>1113 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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