DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts16

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_742050.2 Gene:Adamts16 / 271127 MGIID:2429637 Length:1222 Species:Mus musculus


Alignment Length:1139 Identity:271/1139 - (23%)
Similarity:409/1139 - (35%) Gaps:352/1139 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LIFGSRSPEEAP--EFKLVHLAQQRPEEQQR--------LE----------ERKRPGEAEQHGGN 120
            |:....|.::.|  ...|...|...||:.|.        ||          |....|:...|...
Mouse    12 LLLAQVSEQQTPACALGLAAAASGSPEDPQPPPFSGSSWLETGEYDLVSAYEVDHRGDYVSHDIM 76

  Fly   121 PHQRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRRTENGTQFVEHS 185
            .:|||:||...::.|...|    ..:..|...:..|.|:.:..|:...|:.....:.||:    |
Mouse    77 HYQRRRRRRAVTQPGGDAL----HLRLKGPRHDLHLDLKAASNLMAPGFMVQTLGKGGTK----S 133

  Fly   186 PQLLKRLERCFYR-------SPAAALDLCEPGNVRGVFQQNGSDLVIHPLP----------ARFG 233
            .|:....|.|||:       :.:.||..|:  .:.|:.:...:|..:.|||          |:..
Mouse   134 VQMFPPEENCFYQGSLRSQGNSSVALSTCQ--GLLGMIRTKDTDYFLKPLPPHLTSKLNRSAQGD 196

  Fly   234 TGTHVLYQARVDKSGGGYSEASSRRTASPLDSQLQFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQ 298
            :.:||||:...::                     |...:.|.....|:|..|            :
Mouse   197 SPSHVLYKRSTER---------------------QAPRENEVLMITRKRDLA------------R 228

  Fly   299 PRHHHPH--------QHHQQRRRRYIGDAPRSRWSDIP-------------------EELFIETA 336
            |..||.:        ||...||::|:...|......:|                   |||.:||.
Mouse   229 PHLHHDNFHLGPSQKQHFCGRRKKYMPQPPNDDLYILPDEYKPSSRHKRSLLKSHRNEELNVETL 293

  Fly   337 IFVDSDLYAHMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSWDPPGL 401
            :.||       :|...::....:.:::|.::|.|..|:...|:|..||.|:..|.:.:. :.|||
Mouse   294 VVVD-------RKMMQSHGHENITTYVLTILNMVSALFKDGTIGGNINIVIVGLILLED-EQPGL 350

  Fly   402 VRSRDVENYLNSFCKWQEKLNPFSDADPLHYDHALVLTGLDLVTYDKGKANSQVVGMATVKGMCT 466
            ..|...::.|.|||:||..|   ...|...:|||::|||||:.::.....::  :|.|.:.|||:
Mouse   351 AISHHADHTLTSFCQWQSGL---MGKDGTRHDHAILLTGLDICSWKNEPCDT--LGFAPISGMCS 410

  Fly   467 SIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISCDPTM-HIMSPKLG--SGKVTWSKCSRT 528
            ...|||:||.......|.:|||.|||.||.||.:...|..:. :||||.|.  :|..:||.|||.
Mouse   411 KYRSCTVNEDSGLGLAFTIAHESGHNFGMVHDGEGNMCKKSEGNIMSPTLAGRNGVFSWSSCSRQ 475

  Fly   529 YLEDFLMDPQAECLFDRDSFAGPWDHTAGGRLPGERFNANQQCMLRFGKNFMQASTQSKMEICRD 593
            ||..||...||.||.|:......:.:..  :|||:.::||.||..:||:.........:.:||:.
Mouse   476 YLHKFLSTAQAICLADQPKPVKEYKYPE--KLPGQLYDANTQCKWQFGEKAKLCMLDFRKDICKA 538

  Fly   594 LHCRQDGLPWTSH--PALEGTECGPNMWCRGGTCEARSSKQGSYSALKSWPPEHIPEATHEKIIR 656
            |.|.:.|....:.  ||.|||.||.:||||||.| .:...:|             |:.||     
Mouse   539 LWCHRIGRKCETKFMPAAEGTLCGQDMWCRGGQC-VKYGDEG-------------PKPTH----- 584

  Fly   657 HEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGLRTLNRSCLN- 720
                                    .:|.:||..|.|...|..|.|.|           :|.|.| 
Mouse   585 ------------------------GHWSDWSPWSPCSRTCGGGISHR-----------DRLCTNP 614

  Fly   721 FPSR----CIGRDRRFVTCNTPQCHKVPVQTINDFATQVCMQAR---------KSDPELTGEGQQ 772
            .||.    |.|..|....||:.:|   |:.:: ||....|.:..         |..|....|.|.
Mouse   615 RPSHGGKFCQGSTRTLKLCNSQRC---PLDSV-DFRAAQCAEYNSKRFRGWLYKWKPYTQLEDQD 675

  Fly   773 LPSTLDASCKIFCRTR--------TNGTKSRRWTFPDGTTCKAKQHNPEDITYCISGRCERFSCD 829
            |       ||::|...        :|..|       |||.|.....|     .||.|.|||..||
Mouse   676 L-------CKLYCIAEGFDFFFSLSNKVK-------DGTPCSEDSRN-----VCIDGMCERVGCD 721

  Fly   830 NSTSNFFKMDS-SFCEARSVRPTRDSSDQESRQQTNRQRYAERQEGKPQKNHYENE---VAKRPS 890
            |...:....|| ..|:..:           |...|:|..|:        |:|..|:   :...||
Mouse   722 NVLGSDATEDSCGVCKGNN-----------SDCVTHRGLYS--------KHHSTNQYYHMVTIPS 767

  Fly   891 YGQGNHI---NAPASPYKRRNYHKPY----------------------------PPEIPRPPPPA 924
            ..:..||   |...|....||..|.|                            .||....|.|.
Mouse   768 GARSIHIYETNISTSYISVRNSLKRYYLNGHWSVDWPGRYKFSGATFNYKRSYKEPENLTSPGPT 832

  Fly   925 SASLI----------------ALDRSSSSES-------EW-VAHPGCHSNC----MTDSKG---- 957
            :.:||                :|.||.:.::       .| :....|..:|    |....|    
Mouse   833 NETLIVELLFQGRNPGVAWEFSLPRSGAKKTPAAQPSYSWAIVRSECSVSCGGGKMNSKAGCYRD 897

  Fly   958 ---------VQGVTSRLTGVESIQLCSYRIQPCERLQTAAEYA--EQTC--------------AR 997
                     ....|..:||     |...::.||....:...::  .:||              |.
Mouse   898 LKVPVNASFCNPKTRPVTG-----LVPCKVSPCPSSWSVGNWSVCSRTCGGGTQSRPVRCTRRAH 957

  Fly   998 YRQKVRGLSGHGAQISASI-DEPDRSCRVGCQDE 1030
            ||.:         .|.||: .:|:......|..:
Mouse   958 YRDE---------SIPASLCPQPEPPIHQACNSQ 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801 76/214 (36%)
ADAMTS_CR_2 561..625 CDD:465496 26/65 (40%)
TSP1 683..741 CDD:214559 19/62 (31%)
Adamts16NP_742050.2 Pep_M12B_propep 88..203 CDD:460254 26/124 (21%)
Cysteine switch. /evidence=ECO:0000250 245..253 3/7 (43%)
ZnMc_ADAMTS_like 288..489 CDD:239801 75/213 (35%)
ADAMTS_CR_2 506..573 CDD:465496 27/67 (40%)
TSP1 587..639 CDD:214559 20/65 (31%)
ADAMTS_CR_3 643..743 CDD:437068 31/130 (24%)
Spacer 745..871 25/133 (19%)
ADAMTS_spacer1 745..856 CDD:461796 22/118 (19%)
TSP1_ADAMTS 929..984 CDD:465950 10/63 (16%)
TSP1_ADAMTS 988..1045 CDD:465950
TSP1_ADAMTS 1053..1112 CDD:465950
TSP1_ADAMTS 1128..1178 CDD:465950
PLAC 1188..1218 CDD:462560
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.