DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts5

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_035912.2 Gene:Adamts5 / 23794 MGIID:1346321 Length:930 Species:Mus musculus


Alignment Length:697 Identity:185/697 - (26%)
Similarity:259/697 - (37%) Gaps:161/697 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 CFYR-----SP--AAALDLCEPGNVRGVFQQNGSDLVIHPL--------PARFGTGT----HVLY 240
            ||||     ||  .|..|||  |.:.|.|....:...:.||        ...:|.|:    ||  
Mouse   132 CFYRGTVDGSPRSLAVFDLC--GGLDGFFAVKHARYTLKPLLRGSWAEYERIYGDGSSRILHV-- 192

  Fly   241 QARVDKSGGGYS----EASSRRTASPLDSQLQFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRH 301
               .::.|..:.    .||....|||  |..|..|...  :..|||.....||..  ...|.|..
Mouse   193 ---YNREGFSFEALPPRASCETPASP--SGPQESPSVH--SRSRRRSALAPQLLD--HSAFSPSG 248

  Fly   302 HHPHQHHQQRRRRYIGDAPRSRWSDIPEELFIETAIFVDSDLYAHMQKNFPTNTESKVVSFLLAM 366
            :...|...:||||.|..|.:           :|..:..||.: |.|...       .:..:||.:
Mouse   249 NAGPQTWWRRRRRSISRARQ-----------VELLLVADSSM-ARMYGR-------GLQHYLLTL 294

  Fly   367 INGVQLLYHHPTLGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKWQEKLNPFSDADPLH 431
            .:....||.|.::...|...:.::.:....| ..|..|::....|.:|||||.:.|...|....|
Mouse   295 ASIANRLYSHASIENHIRLAVVKVVVLTDKD-TSLEVSKNAATTLKNFCKWQHQHNQLGDDHEEH 358

  Fly   432 YDHALVLTGLDLVTYDKGKANSQVVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMR 496
            ||.|::.|..||.    |..:...:|||.|..:|:...||.:.|.....:.|.|||||||.||:.
Mouse   359 YDAAILFTREDLC----GHHSCDTLGMADVGTICSPERSCAVIEDDGLHAAFTVAHEIGHLLGLS 419

  Fly   497 HDAKEISCDPTM------HIMSPKLGS--GKVTWSKCSRTYLEDFLMDPQAECLFD--RDSFAGP 551
            ||..:. |:...      .:||..|.|  ....||||:...:.:||.|....||.|  |....||
Mouse   420 HDDSKF-CEENFGTTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQILGP 483

  Fly   552 WDHTAGGRLPGERFNANQQCMLRFGKNFMQASTQSKMEICRDLHC---RQDGLPWTSH--PALEG 611
            .:      |||:.::|.|||.|.||..:   |....|::|..|.|   ||..:...:.  ||:||
Mouse   484 EE------LPGQTYDATQQCNLTFGPEY---SVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEG 539

  Fly   612 TECGPNMWCRGGTCEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNEL 676
            |.||....|..|.|..::.|: .||.                                       
Mouse   540 TPCGKGRVCLQGKCVDKTKKK-YYST--------------------------------------- 564

  Fly   677 PGSPSNWGEWSEPSACESGCLYG-----------QSRRLLEGSTGLRTLNRSCLNFPSRCIGRDR 730
             .|..|||.|.....|...|..|           ..|......||.|.:.|||...|....|:..
Mouse   565 -SSHGNWGSWGPWGQCSRSCGGGVQFAYRHCNNPAPRNSGRYCTGKRAIYRSCSVTPCPPNGKSF 628

  Fly   731 RFVTCNTPQCHKVPVQTINDFATQVCMQARKSDPELTGEGQQLPSTLDASCKIFCRTRTNG---T 792
            |...|.....::...:.:..|...|        |:..|   .||:.:   ||:.||.:..|   .
Mouse   629 RHEQCEAKNGYQSDAKGVKTFVEWV--------PKYAG---VLPADV---CKLTCRAKGTGYYVV 679

  Fly   793 KSRRWTFPDGTTCKAKQHNPEDITYCISGRCERFSCDNSTSNFFKMD 839
            .|.:.|  |||.|:     |...:.|:.|||.|..||....:..:.|
Mouse   680 FSPKVT--DGTECR-----PYSNSVCVRGRCVRTGCDGIIGSKLQYD 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 18/62 (29%)
ZnMc_ADAMTS_like 331..543 CDD:239801 63/219 (29%)
Reprolysin 332..545 CDD:279729 65/222 (29%)
TSP1 683..741 CDD:214559 17/68 (25%)
Adamts5NP_035912.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..68
Pep_M12B_propep 68..174 CDD:279848 15/43 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..231 9/27 (33%)
Cysteine switch. /evidence=ECO:0000250 207..214 2/6 (33%)
Reprolysin 269..476 CDD:279729 65/220 (30%)
ZnMc_ADAMTS_like 269..473 CDD:239801 63/217 (29%)
ADAM_CR 486..556 CDD:301627 27/72 (38%)
TSP1 570..622 CDD:214559 14/51 (27%)
Spacer 732..874
ADAM_spacer1 732..852 CDD:283607
TSP1 879..930 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6268
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

Return to query results.
Submit another query.