DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamtsl4

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001288634.1 Gene:Adamtsl4 / 229595 MGIID:2389008 Length:1036 Species:Mus musculus


Alignment Length:673 Identity:138/673 - (20%)
Similarity:184/673 - (27%) Gaps:298/673 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 LPWTSH-PALEGT---------------ECGPNM------WCRGGTCEARSSKQGSYSALKSWPP 643
            ||.||. |:..||               ..||.|      |         ||.||   |.:..||
Mouse   226 LPRTSSAPSYTGTPAPTSSFGDSRSFQGSLGPRMPPSPGSW---------SSPQG---AERRHPP 278

  Fly   644 EHIPEATHEKIIRH----EPNRIP----PLLHDYNPMDNELPGSPSNWGEWS--EPSACESGCLY 698
            ...|....::..||    .|:|.|    ||..|.:|:             ||  .||.....| .
Mouse   279 PFSPVPRSQQSRRHWRPPGPHRSPDGWLPLTRDSSPL-------------WSIFAPSIPAPNC-S 329

  Fly   699 GQSRRLLEGSTGLRTLNRSCLNFPSRCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCM-QARKS 762
            |:|.::           |:|...|......|.|.:.|..             |.:|..| |..:.
Mouse   330 GESEQM-----------RACSQEPCPPEQPDPRALQCAA-------------FDSQEFMGQLYQW 370

  Fly   763 DPELTGEGQQLPSTLDASCKIFCRTR-----TNGTKSRRWTFPDGTTCKAKQHNPEDITYCISGR 822
            :|....:|.|       .|::.||.|     ...|:.    ..|||.|:     |..:..|::||
Mouse   371 EPFTEVQGSQ-------RCELNCRPRGFRFYVRHTEK----VQDGTLCQ-----PGSLDICVAGR 419

  Fly   823 CERFSCDNSTSNFFKM--------DSSFCE----------------------------------- 844
            |....||....:..:.        |.|.|.                                   
Mouse   420 CLSPGCDGVLGSGRRPDGCGVCGGDGSTCRLVSGNLTDRGGPLGYQKILWIPAGASHLHISQLRP 484

  Fly   845 -----------ARSV-----------------------RPTRDSSDQESRQQTNRQR-----YAE 870
                       .||:                       ||.|:....||........     |..
Mouse   485 SSNYLALRGPGGRSIINGNWAVDPPGSYTAIGTVFQYNRPPREEGKGESLSAEGPTTQPVDVYMI 549

  Fly   871 RQEGKPQKNHYENEVAKRPSYGQGNHINAPA-SPYKRRNYHKPYPPEIPRP-------------- 920
            .||..|.. .|:..::..|:..:......|| .|.......:|..|..|||              
Mouse   550 FQEDNPGV-FYQYVISSPPAVLESPSTKPPALQPQPEMLRGEPLLPSAPRPVRAPGTLQRQVRIP 613

  Fly   921 --PPPASASLIALDRSSSSESEW--VAHPGCHSNCMTDSKGVQGVTSRLTGVESIQLCSYRIQPC 981
              |||....    ....||...|  |.|..|.::|   .|||.         ..|.||..|    
Mouse   614 QVPPPTRVR----TAMGSSAGYWKQVGHSECSASC---GKGVW---------HPIFLCISR---- 658

  Fly   982 ERLQTAAEYAEQTCARYRQKVRGLSGHGAQISASIDEP------------------DRSCRVGCQ 1028
               ::..|..||:||           .||:..|| .||                  .|||..|.|
Mouse   659 ---ESGEELDEQSCA-----------VGARPPAS-PEPCHGPPCPPYWEAGEWTSCSRSCGPGTQ 708

  Fly  1029 DEFIKYRYYLVNG-------RNGHFP--------------------PGTRCSPVGKRYCVYG--- 1063
            ...:..|.....|       |.||.|                    |.::||.    .|..|   
Mouse   709 HRQLLCRQEFGGGGSSVPPERCGHLPRPNITQPCQLHLCGHWEISSPWSQCSV----RCGRGQRS 769

  Fly  1064 ---RCLEFGDDDLPLDKTHISLG 1083
               ||:....|:  :||...:.|
Mouse   770 RQVRCVGSNGDE--VDKQECASG 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801
Reprolysin 332..545 CDD:279729
TSP1 683..741 CDD:214559 13/59 (22%)
Adamtsl4NP_001288634.1 TSP1 46..>70 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..149
PHA03247 <161..360 CDD:223021 42/183 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..308 24/93 (26%)
ADAM_spacer1 449..563 CDD:368694 12/114 (11%)
TSP1_ADAMTS 638..687 CDD:408800 20/79 (25%)
TSP1_ADAMTS 691..747 CDD:408800 11/55 (20%)
TSP1_ADAMTS 755..805 CDD:408800 11/42 (26%)
TSP1_ADAMTS 809..870 CDD:408800
TSP1_ADAMTS 876..932 CDD:408800
TSP1_ADAMTS 936..987 CDD:408800
PLAC 995..1024 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13723
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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