DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts20

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_006520926.1 Gene:Adamts20 / 223838 MGIID:2660628 Length:1915 Species:Mus musculus


Alignment Length:1118 Identity:250/1118 - (22%)
Similarity:384/1118 - (34%) Gaps:362/1118 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 NPHQRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRRTE-------- 176
            |.|..|::||     ...|.||.......   :.|..||.|.....|.||:....||        
Mouse    67 NRHFSRKKRS-----SGVPEPPPFRTHYR---ISAYGQLFQLNLSADAAFLAAGYTEVHLGTPVP 123

  Fly   177 -NGTQFVEHSPQLLKRLERCFYRSP-------AAALDLCEPGNVRGVFQQNGSDLVIHPLPARFG 233
             .|.:..| ||.    |..||||..       .|...||  |.:.|.|:.|..:..:.|:....|
Mouse   124 GPGGRSTE-SPD----LRHCFYRGQVNAREDHTAVFSLC--GGLMGTFKANDGEYFLEPVLRADG 181

  Fly   234 TG-------THVLYQARVDKSGGG-------YSEASSRRTASPLDSQLQFEPDAEEFNEPRRRLR 284
            :.       .|::|:..:.::...       .||....:||.|..|......|.:...|...||.
Mouse   182 SAHDDDHNKPHLIYRQELKRNSFARSHKPCEVSENQMEKTALPSQSSRNTTGDVDIEEEAVFRLE 246

  Fly   285 AQ-SQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPRSRWSDIPEELFIETAIFVDSDLYAHMQ 348
            .: |||.|                   |.:|:: ..||          ::|..:..|:.:..|..
Mouse   247 GERSQLHS-------------------RNKRFL-SYPR----------YVEVMVTADAKMVHHHG 281

  Fly   349 KNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNS 413
            :|        :..::|.:::.|..:|...::|..||.|:.:|.:..| :..|.|.|.:....|.:
Mouse   282 QN--------LQHYVLTLMSIVAAIYKDSSIGNLINIVIVKLVVIHS-EQEGPVISFNAATTLRN 337

  Fly   414 FCKWQEKLNPFSDADPLHYDHALVLTGLDLVTYDKGKANSQVVGMATVKGMCTSIYSCTINEAKH 478
            ||.||:..|...||.|.|:|.|:::|..|:.   ..|.....:|:|.:..:|....||:|:|...
Mouse   338 FCLWQQSQNVPDDAHPSHHDTAVLITREDIC---GAKEKCDTLGLAELGTLCDPSRSCSISEENG 399

  Fly   479 FESVFVVAHEIGHNLGMRHD----AKEISCDPTMHIMSPKLG--SGKVTWSKCSRTYLEDFLMDP 537
            ..:.|.:|||:||...:.||    .||.......|:|:|.|.  :...|||.||:.::.:||...
Mouse   400 LSAAFTIAHELGHVFNVPHDDSFKCKEAGIKHQYHVMAPTLNYHTSPWTWSACSQKHITEFLDTG 464

  Fly   538 QAECLFDRDSFAGPWDHTAGGR-------LPGERFNANQQCMLRFGKNFMQASTQSKMEICRDL- 594
            ..|||.|:.:          ||       |||..::.|:||.|.||..         .::|..| 
Mouse   465 HGECLLDKPN----------GRTYDLSPQLPGSVYDGNRQCELMFGPG---------SQVCPYLK 510

  Fly   595 HCRQDGLPW------------TSH-PALEGTECGPNMWCRGGTCEARSSKQGSYSALKSWPPEHI 646
            |||:   .|            |.| |..:||.|||.|.|..|.|..|..                
Mouse   511 HCRR---LWCTSAEGVHKGCRTQHMPLADGTSCGPGMHCHRGLCVTRDM---------------- 556

  Fly   647 PEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGL 711
                                 :..|:|.|       ||.|...|:|...|           ..|:
Mouse   557 ---------------------ETRPVDGE-------WGPWGPYSSCSRTC-----------GGGI 582

  Fly   712 RTLNRSC-----LNFPSRCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCMQARKSDPELTG--- 768
            ::..|.|     .|....|:||..:|.:|||..|.|..    .||..:.|........::.|   
Mouse   583 KSTARLCDRPEPRNGGRYCVGRRMKFRSCNTDSCPKGK----RDFREKQCSDFDGKHFDINGLPP 643

  Fly   769 EGQQLPS----TLDASCKIFCRTRTNGTKS---RRWTFPDGTTCKAKQHNPEDITYCISGRCERF 826
            ..:.||.    .:...||::||..  ||.|   .:....|||.|..:.:   ||  |:.|.|.:.
Mouse   644 NVRWLPKYSGIAVKDRCKLYCRVA--GTTSFYQLKDRVADGTPCGTETN---DI--CVQGLCRQA 701

  Fly   827 SCDNSTSNFFKMDS-SFCEARSVRPTRDSSDQESRQ----------------------QTNRQRY 868
            .||:..::..|.|. ..|          ..|..|.|                      .||.:..
Mouse   702 GCDHVLNSKAKRDKCGVC----------GGDNSSCQTLAGVFNSAHYGYNVVVKIPAGATNIEIL 756

  Fly   869 AERQEGKPQKNHYENEVAKRPSYG----QGNHINAPASPYKRRNYHKPYPPEIPRPPPPASASLI 929
            .....|:|:.::|   :|...:.|    .||.:.:.|.  |..|        |.......|.|..
Mouse   757 QHSYSGRPEDDNY---LALSDTQGNFLLNGNFVVSMAK--KEIN--------IQGAVFEYSGSNN 808

  Fly   930 ALDRSSSS---ESEWVAHPGCHSNCMT--------------------DSKGV-QGVTSRLTGVES 970
            :::|.:|:   |:|.|....|..|...                    |..|. |..|....|:..
Mouse   809 SIERINSTDRLEAELVLQVLCVGNLYNPDVRYSFNIPIEERSNLFSWDPYGPWQDCTKMCQGLHR 873

  Fly   971 IQLCSYRIQPCERLQTAAEYAEQTCARYRQKVRGLSGHGAQISASIDEP---DRSCRVGCQDEFI 1032
            .::.      |.|....|..::..|           ||       :..|   ...|.:.|:    
Mouse   874 RKIA------CVRKSDHAVVSDHNC-----------GH-------LPMPLFVTEKCNMDCE---- 910

  Fly  1033 KYRYYLVNGRN--------GHFPPGTRCS----------PVGKRYC-----------VYGRCLEF 1068
             .|:::: |::        |:......|.          |||.:||           .:|.|:  
Mouse   911 -LRWHII-GKSDCSSQCGQGYRTLDVHCMKYSVHKGQAVPVGDQYCGDQLKPPSREPCHGSCV-- 971

  Fly  1069 GDDDLPLDKTHIS 1081
                  |.:.|.|
Mouse   972 ------LTRWHYS 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 27/106 (25%)
ZnMc_ADAMTS_like 331..543 CDD:239801 61/217 (28%)
Reprolysin 332..545 CDD:279729 62/218 (28%)
TSP1 683..741 CDD:214559 17/62 (27%)
Adamts20XP_006520926.1 Pep_M12B_propep 50..195 CDD:366707 36/142 (25%)
ZnMc_ADAMTS_like 264..470 CDD:239801 62/227 (27%)
ADAM_CR_2 485..552 CDD:375321 25/78 (32%)
TSP1 565..617 CDD:214559 17/62 (27%)
ADAM_spacer1 727..845 CDD:368694 23/130 (18%)
TSP1 975..1028 CDD:214559 2/4 (50%)
TSP1 1030..1082 CDD:214559
TSP1 1085..1139 CDD:214559
TSP1 1164..>1188 CDD:214559
TSP1 1213..1269 CDD:214559
TSP1 1313..1365 CDD:214559
TSP1 1366..1420 CDD:214559
TSP1 1428..1479 CDD:214559
GON 1719..1914 CDD:370060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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