DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and THSD7A

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_056019.1 Gene:THSD7A / 221981 HGNCID:22207 Length:1657 Species:Homo sapiens


Alignment Length:673 Identity:118/673 - (17%)
Similarity:187/673 - (27%) Gaps:294/673 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 INEAKHFESVFVVAHEIGHNLGMRHDAKEISCDPTMHIMSPKLGSGKVTWSKCSRTY-------- 529
            :|:|:.:|  .|..|.              .|:..:.:..|        ||.|..|:        
Human  1079 VNQAQVYE--VVPCHS--------------DCNQYLWVTEP--------WSICKVTFVNMRENCG 1119

  Fly   530 ---------------------LEDFLMDPQ--------------AECLFDRDSFAGPWDHTAGGR 559
                                 :||:|.||:              .:|:.   |..|||       
Human  1120 EGVQTRKVRCMQNTADGPSEHVEDYLCDPEEMPLGSRVCKLPCPEDCVI---SEWGPW------- 1174

  Fly   560 LPGERFNANQQCMLRFGKNFMQASTQSKMEICRDLHCRQDGLPWTSHPALEGTECGPNMWCRGGT 624
                     .||:|.                |.....||........||.||..| ||       
Human  1175 ---------TQCVLP----------------CNQSSFRQRSADPIRQPADEGRSC-PN------- 1206

  Fly   625 CEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWG--EWS 687
                        |::..|........|               :|||..|         |.  :.|
Human  1207 ------------AVEKEPCNLNKNCYH---------------YDYNVTD---------WSTCQLS 1235

  Fly   688 EPSACESGCLYGQSRRLLE--GSTGLRTLNRSCLNFPSRCIGRDRRFVTCNTPQCHKVPVQ-TIN 749
            |.:.|.:|.    ..|:|:  .|.|.....:.|     ..:|.::.: ..||....:.||. .::
Human  1236 EKAVCGNGI----KTRMLDCVRSDGKSVDLKYC-----EALGLEKNW-QMNTSCMVECPVNCQLS 1290

  Fly   750 DFA-----TQVC------MQARKSDPELTGEGQQLPSTLDAS--CKIFCRTRTNGTKSRRWTFPD 801
            |::     :|.|      ::.|.......|:|:..||.:|.|  |.:        ....||.:..
Human  1291 DWSPWSECSQTCGLTGKMIRRRTVTQPFQGDGRPCPSLMDQSKPCPV--------KPCYRWQYGQ 1347

  Fly   802 GTTCKAKQHNPEDITYCISG-RCERFSC---DNSTSNFFK-MDSSFCEARSVRPTRDSSDQESRQ 861
            .:.|:.::      ..|..| |....||   |.|..:|.| :|..||           :|.|...
Human  1348 WSPCQVQE------AQCGEGTRTRNISCVVSDGSADDFSKVVDEEFC-----------ADIELII 1395

  Fly   862 QTNRQRYAERQEGKPQKNHYENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPPEIPRPPPPASA 926
            ..|:....|....:|                      .|...|.:                    
Human  1396 DGNKNMVLEESCSQP----------------------CPGDCYLK-------------------- 1418

  Fly   927 SLIALDRSSSSESEWVAHPGCHSNCMT-DSKGVQGVTSRLTGVESIQLCSYRIQPCERLQTAAEY 990
                         :|.:...|...|:. :..|..|:..|...|...:|.:..:.|.:.|:|.:.|
Human  1419 -------------DWSSWSLCQLTCVNGEDLGFGGIQVRSRPVIIQELENQHLCPEQMLETKSCY 1470

  Fly   991 AEQTCARYR---------------QKVRGLSGHGAQISASIDEPDRSCRVGCQDEFIKYRYYLVN 1040
            ..| |..|:               |:..|::..|..:..|..:.||||...|..           
Human  1471 DGQ-CYEYKWMASAWKGSSRTVWCQRSDGINVTGGCLVMSQPDADRSCNPPCSQ----------- 1523

  Fly  1041 GRNGHFPPGTRCSPVGKRYCVYG 1063
                   |.:.||.....:|..|
Human  1524 -------PHSYCSETKTCHCEEG 1539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801 17/112 (15%)
Reprolysin 332..545 CDD:279729 17/114 (15%)
TSP1 683..741 CDD:214559 13/61 (21%)
THSD7ANP_056019.1 TSP1 197..247 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..311
TSP_1 364..412 CDD:301595
TSP1 1039..>1077 CDD:214559
TSP1 1290..1340 CDD:214559 11/57 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1570..1591
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.