DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts2

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_783574.1 Gene:Adamts2 / 216725 MGIID:1347356 Length:1213 Species:Mus musculus


Alignment Length:1152 Identity:262/1152 - (22%)
Similarity:390/1152 - (33%) Gaps:338/1152 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 EQHGGNPHQRRQR-RSLP-SEDGNGPLPPEEEEQE-AGEDVEAR--------------------- 155
            |..||.|.|..:| .::| ..|..|.|.......| ||..|.||                     
Mouse    43 EPPGGPPGQGAERILAVPVRTDAQGRLVSHVVSLETAGAGVRARRAALDQTSGLPGGAAQDPGGR 107

  Fly   156 -------------LQLQQSPQLIDDAFIFIRRTENGTQFVEHSPQLLKRLERCFY--------RS 199
                         |:|:.:.:|:........:.|.|...||      ..|..|.|        ::
Mouse   108 LFYNLTVFGRDLHLRLRPNARLVAPGATVEWQGETGDTRVE------PLLGSCLYVGDVADLPKA 166

  Fly   200 PAAALDLCEPGNVRGVFQQNGSDLVIHPL-------PARFGTGTHVLYQARVDKSGGGYSEASSR 257
            .:.||..|:  .:.|:.:....:..|.||       .|..|. .||:|                |
Mouse   167 SSVALSNCD--GLAGLIRMEEEEFFIEPLEKGQTDQEAEQGR-VHVVY----------------R 212

  Fly   258 RTASPLDSQLQFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPRS 322
            |..:|....:. ||.|.:....:..|.:.|:....|..|.        ...::|.||:..|    
Mouse   213 RPPTPKPPPVS-EPQALDTGVSQGNLDSLSRALGVLEERI--------NSSRRRVRRHATD---- 264

  Fly   323 RWSDIPEELFIETAIFVDSDLY-----AHMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRR 382
                  ::..||..:.||..:.     .|:||            :||.::|.|..:||..:||..
Mouse   265 ------DDYNIEVLLGVDDSVVQFHGKEHVQK------------YLLTLMNIVNEIYHDESLGAH 311

  Fly   383 INFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKW---QEKLNPFSDADPLHYDHALVLTGLDLV 444
            ||.||.|:.:........|:...:....|.:.|:|   |:|  |.:|.|..| |||:.||..|. 
Mouse   312 INVVLVRIILLSHAKSMSLIEIGNPSQSLENVCRWAYLQQK--PDTDHDEYH-DHAIFLTRQDF- 372

  Fly   445 TYDKGKANSQVVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISCDPTMH 509
                |.:..|  |.|.|.|||..:.|||:|....|.|.||||||.||.|||.||.:...|...:.
Mouse   373 ----GPSGMQ--GYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNRCGDEVR 431

  Fly   510 ---IMSPKLGSG--KVTWSKCSRTYLEDFLMDPQAECLFDRDSFAGPWDHTAGGRLPGERFNANQ 569
               ||:|.:.:.  :..||:||:..|..:|  ...:||.| |.||..|  .|..:|||..::.|:
Mouse   432 LGSIMAPLVQAAFHRFHWSRCSQQELSRYL--HSYDCLRD-DPFAHDW--PALPQLPGLHYSMNE 491

  Fly   570 QCMLRFGKNFMQASTQSKMEICRDLHCRQDGLPW----TSHPALEGTECGPNMWCRGGTCEARSS 630
            ||...||..:|..:.....:.|:.|.|.....|:    ...|.|:||.|.|...|..|.|     
Mouse   492 QCRFDFGLGYMMCTAFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDGTMCAPGKHCFKGHC----- 551

  Fly   631 KQGSYSALKSW-PPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACES 694
                     .| .|:         |::.:                      .|||.|:...:|..
Mouse   552 ---------IWLTPD---------ILKRD----------------------GNWGAWTPFGSCSR 576

  Fly   695 GCLYGQSRRLLEGSTGLRTLNRSCLN-FPSR----CIGRDRRFVTCNTPQCHKVPVQTINDFATQ 754
            .|           .||::...|.|.| .|:.    |.|....|..||...|    ..::.||..:
Mouse   577 TC-----------GTGVKFRTRQCDNPHPANGGRTCSGLAYDFQLCNPQDC----PNSLADFREE 626

  Fly   755 VCMQARKSDPEL---TGEGQQ--LP-STLDAS--CKIFCRTRTNG-TKSRRWTFPDGTTCKAKQH 810
            .|.|.     :|   .|:.|.  || ...||.  |.::|.::..| ..|.:....|||.|..|  
Mouse   627 QCQQW-----DLYFEHGDVQHHWLPHEHRDAKERCHLYCESKETGEVVSMKRMVHDGTRCSYK-- 684

  Fly   811 NPEDITYCISGRCERFSCD---NSTSNFFKM-----DSSFCEARSVRPTRDSSDQESRQQTN--- 864
              :..:.|:.|.|.:..||   .|.....|.     |::.|:......||....|:..:...   
Mouse   685 --DAFSLCVRGDCRKVGCDGVIGSRKQEDKCGVCGGDNTHCKVVKGTFTRSPRKQDYIKMFEIPA 747

  Fly   865 RQRYAERQEGKPQKNH--YENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPPEIPR-------- 919
            ..|:...||.....:|  .:|....:....:.||::..:..:........|..|..|        
Mouse   748 GARHLLIQEADTTSHHLSVKNLETGKFILNEENHLDPNSRSFIAMGVEWEYRNEDERETLQTIGP 812

  Fly   920 ----------PPPPASASL----------IALDRSSSSESEWVAH-------PGCHSNC------ 951
                      |......||          :.:|.::..|.:.|.|       ..|...|      
Mouse   813 LHGTITVLVIPEGDTRISLTYKYMIHEDSLNVDDNNVLEDDAVRHEWALKKWSPCSKPCGGGSQF 877

  Fly   952 -------MTDSKGV-QGVTSRLTGVESI------QLCSYRI------QPCERLQTAAEYAEQTCA 996
                   ..|||.| :...|.|...::|      |.||..:      :||          .|:|.
Mouse   878 TKYGCRRRLDSKMVHRAFCSALAKPKAIRRACNPQECSQPVWVTGEWEPC----------TQSCG 932

  Fly   997 RYRQKVRGL------------SGHGAQISASIDEPDRSC---------RVGCQDEF-------IK 1033
            |...:||.:            |.|....:....|..|:|         |.|...:.       .:
Mouse   933 RTGMQVRSVRCIQPLHNNTTRSVHTKHCNDHRPESRRACNRELCPGRWRAGSWSQCSVTCGNGTQ 997

  Fly  1034 YRYYLVNGRNGHFPPGTRCSPVGKRYCVYGRCLEFGDDDLPLDKTHI 1080
            .|..|....:.:|.......|...|.|....|...|.|  |..|:::
Mouse   998 ERPVLCRTADDNFGVCREERPETARICRLAPCPRNGSD--PSKKSYV 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 21/132 (16%)
ZnMc_ADAMTS_like 331..543 CDD:239801 74/224 (33%)
Reprolysin 332..545 CDD:279729 75/225 (33%)
TSP1 683..741 CDD:214559 16/62 (26%)
Adamts2NP_783574.1 Pep_M12B_propep 99..210 CDD:279848 20/119 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..232 7/37 (19%)
ZnMc_ADAMTS_like 267..468 CDD:239801 74/224 (33%)
Reprolysin 269..471 CDD:279729 76/226 (34%)
TSP1 565..617 CDD:214559 17/66 (26%)
Cell attachment site. /evidence=ECO:0000255 692..694 0/1 (0%)
Spacer 723..851 18/127 (14%)
ADAM_spacer1 724..838 CDD:283607 16/113 (14%)
TSP1 864..915 CDD:214559 10/50 (20%)
TSP1 918..977 CDD:214559 12/68 (18%)
TSP1 983..1030 CDD:214559 7/46 (15%)
PLAC 1064..1094 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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