DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Thsd4

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001035516.2 Gene:Thsd4 / 207596 MGIID:2672033 Length:1018 Species:Mus musculus


Alignment Length:534 Identity:117/534 - (21%)
Similarity:168/534 - (31%) Gaps:148/534 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   647 PEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGL 711
            |...|.|:    |.|:  .:.:..|.|:. .|||..||.|...|||...|           |.|:
Mouse    28 PSTEHRKV----PQRM--AVTEGTPEDSG-SGSPGVWGSWGPWSACSRSC-----------SGGV 74

  Fly   712 RTLNRSCLNFPSRCIGRDRRFVTCNTPQCHKVPV--QTINDFATQVCMQARKSDPE-LTGE--GQ 771
            ....|.||....|..|..|       |....:.:  ..::...|.|.:...:.|.. |.|.  .:
Mouse    75 MEQTRPCLPSSYRARGGSR-------PNGRALSITGHVVSAVRTSVPLHRSQEDQRALAGSNASR 132

  Fly   772 QLPSTLDASCKIFCRTRTNGTKSRRWTFPDGTTCKAKQHNPEDITYCISGRCERFSCDNSTSNFF 836
            |.|:.:..|.....|.|....:..|...|.|         |....|   |:              
Mouse   133 QGPAVVRGSRHPQARGREPSERRSRTRGPIG---------PGKYGY---GK-------------- 171

  Fly   837 KMDSSFCEARSVRPTRDS---SDQESRQQTNRQRYAERQEGKPQKNHYENEVAKRPSYGQGNHIN 898
                    |..:.|.:..   :.|..|:|....|::..||....|..|      ||...|.:|  
Mouse   172 --------APYILPLQTDTTHTPQRLRRQRPSSRHSRSQEASASKQGY------RPPTHQFSH-- 220

  Fly   899 APASPYKRRNYHKPYPPEIPRPPPPASASLIAL--DRSSSSES------EWVAHPGC--HSNCMT 953
              :.|.    |.....|....||..||...:.|  |:|..:.|      |..:|.|.  |.....
Mouse   221 --SQPL----YQSDSGPRSGLPPSEASIYQLPLTHDQSYPAASSLFHRPELSSHHGARPHGAAQA 279

  Fly   954 DSKGVQGVTSRLTGV-ESIQLCSYRIQPCERLQTAAEYAEQTCARYRQK--------------VR 1003
            ..:.::.......|. ...:||:....|    ::.....|..||.|..|              |:
Mouse   280 FPQHLRSTAISCIGAYRQYKLCNTNACP----ESGRSIREVQCASYNNKPFMGRFYEWEPFAEVK 340

  Fly  1004 GLSGHGAQISASIDEPDRSCRVGCQDEFIKYRYYLVNGRNGHFPPGTRCSPVGKRYCVYGRCLEF 1068
            |               :|.|.:.||  ...||:|:.....  ...||.|...|...||.|:|...
Mouse   341 G---------------NRKCELNCQ--ATGYRFYVRQAEK--VIDGTPCDQNGTAICVSGQCKSI 386

  Fly  1069 GDDDL-----PLDKTHISLGQ------LRTRRKRSSISNDLFNITEIFIKPSHSDISAENIEFTQ 1122
            |.||.     .|||..:..|.      :....|.:..|.....:.||   |.    .|..|..|:
Mouse   387 GCDDFLGSDKVLDKCGVCGGDNTGCQVVSGVFKHALTSLGYHRVVEI---PQ----GATKINITE 444

  Fly  1123 PIHVSADELSSKSR 1136
             :|.|.:.|:.:||
Mouse   445 -MHKSNNYLALRSR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801
Reprolysin 332..545 CDD:279729
TSP1 683..741 CDD:214559 16/57 (28%)
Thsd4NP_001035516.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..56 8/28 (29%)
TSP1 57..>81 CDD:214559 10/34 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..240 33/171 (19%)
ADAM_spacer1 412..528 CDD:368694 13/54 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 534..623
TSP1_ADAMTS 627..676 CDD:408800
TSP1_ADAMTS 680..736 CDD:408800
TSP1_ADAMTS 739..793 CDD:408800
TSP1_ADAMTS 797..850 CDD:408800
TSP1_ADAMTS 856..912 CDD:408800
TSP1_ADAMTS 916..967 CDD:408800
PLAC 975..1005 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13723
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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