DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and adt-1

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_510116.2 Gene:adt-1 / 181412 WormBaseID:WBGene00000082 Length:1461 Species:Caenorhabditis elegans


Alignment Length:1186 Identity:290/1186 - (24%)
Similarity:458/1186 - (38%) Gaps:284/1186 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 RRKRSLHYNGIELDKNTLVGHLREHERALIFGSRSPEEAPEFKLVHLAQQRPEEQQRLEERKRPG 112
            |..:|:|:            ||.|.|...:||..:..:.||:.|:                    
 Worm    17 RISQSVHH------------HLNEEELKQVFGVSNKHDVPEYSLI-------------------- 49

  Fly   113 EAEQHGGNPHQRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRR--T 175
            ||.:|             |.::||..:     :..|..|. ..|.|:::.:::....|.:.|  .
 Worm    50 EATRH-------------PLKNGNLKM-----KFTAWNDT-YHLNLRKNSRIVSPHIISVVRHGD 95

  Fly   176 ENGTQFVEHSPQLLKRLERCFYRSPA-------AALDLCEPGNVRGVFQQNGSDLVIHPLPARFG 233
            ::.|.:..     |:..|:|.|:...       ||:..|  |.:.|........||:..||.|  
 Worm    96 DDVTTYAG-----LRDYEQCHYQGEVKSHGNMKAAISDC--GALMGSIVMEDHFLVLQTLPKR-- 151

  Fly   234 TGTHVLYQAR--VDKSGGGY---SEASSRRTASPL-DSQLQFEPDAEEFNEPRRRLRAQSQLQSP 292
              .|.|.:.|  |.|...|.   :|:..|...:.| :.|..|...:|:.::|...:         
 Worm   152 --VHHLQKERHLVYKRSAGLLTNAESKIREEITRLQEEQESFCDTSEQLDDPAMTI--------- 205

  Fly   293 LRLRFQPRHHHPHQHHQQRRRRYIGDAPRSRWSD----IP--EELFIETAIFVDSDLYAHMQKNF 351
                  |.|.|           :....|.|...|    .|  :.:.:|..:|:||.|:.|.::.:
 Worm   206 ------PAHLH-----------FNYTIPTSAQLDSSFIFPNMDPITLEIGLFLDSKLFEHFEREY 253

  Fly   352 PTNTESKVVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSWDP----PGLVRSRDVENYLN 412
            ..:.|..::.|.||:||.|.:||...||...::.|:.|.|:|:: .|    .|:.::...::.|:
 Worm   254 IQDAEQHLLEFSLALINNVHVLYQQDTLTPNLDIVIVRYEMWRT-QPSALSTGVHKNGQAQSLLD 317

  Fly   413 SFCKWQEKLNPFSD-ADPLHYDHALVLTGLDLVTYDKGKANSQVVGMATVKGMCTSIYSCTINEA 476
            :||::|..:||.:| .|..||||.::|||     ||.....:.|.|:|.|..||..:::|::.|.
 Worm   318 AFCRYQAHMNPGTDLTDMNHYDHGVLLTG-----YDIYHTTTSVAGVAPVARMCDPLFACSLVEG 377

  Fly   477 KHFESVFVVAHEIGHNLGMRHDAKEISCDPTMHIMSPKLGSGKVTWSKCSRTYLEDFLM----DP 537
            .|....||:|||:|||:||.||..:..|:....:||...|:||.|||.||......||:    ..
 Worm   378 LHLGRSFVLAHEMGHNMGMVHDGVQNQCNKGCCLMSAVNGAGKTTWSDCSVREFNAFLLQLDESG 442

  Fly   538 QAECLFDRDSFAG--PWDHTAGGRLPGERFNANQQCMLRFGKNFMQASTQSKM--EICRDLHCRQ 598
            :..||  ||:..|  ..:|.:..||||:||.|:|||...:|:::.......|.  :|||.|.|..
 Worm   443 RGNCL--RDASPGLISTNHLSDLRLPGQRFTADQQCSYFWGRDYKVEIPNGKAMDDICRILWCGN 505

  Fly   599 DGLP-WTSHPALEGTECGPNMWCRGGTCEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRI 662
            .|.. .|:||||||:.||.|.||..|.|                              .|....:
 Worm   506 SGSTISTAHPALEGSWCGANKWCHKGQC------------------------------THWTFGL 540

  Fly   663 PPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGLRTLNRSCLNFPS---- 723
            .|:     |:|          |||||....|.||...|.  .:.||..::..:|.|:| |:    
 Worm   541 TPV-----PID----------GEWSEWGGAEKGCPIQQC--AVSGSITVQGQHRDCVN-PAPNNG 587

  Fly   724 --RCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCMQAR----KSDPELTGEGQQLPSTLDASCK 782
              .|.|.:.|.:.|.....:.:.. |..:|..::|...:    |.|.:|||||.: .||  ..|:
 Worm   588 GKTCEGANIRGIVCGATSSNCLGF-TREEFGNKICSSIKYDPHKPDQQLTGEGFE-HST--QPCR 648

  Fly   783 IFCRTRTNGTKSRRWTFPDGTTCKAKQHNPEDITYCISGRCERFSCDNSTSNFFKMDSSFCEARS 847
            ::|....:.....:..|||||.|...       .||:.|:|...||||........|....|.||
 Worm   649 VWCHLIGSELIRNKGQFPDGTPCGFD-------AYCVGGQCLALSCDNKALVEQPEDCPRIEGRS 706

  Fly   848 VRPTRDSSD---------------QESRQQTNRQRYAERQEGKPQKNHYENEVAKRPSYGQGNHI 897
            |....:.|.               :|.:..:.|:.....:|.:|    .|..:.....:|:....
 Worm   707 VHQWEEWSSWSECSVSCGLGGREVRERKCSSGRKCQGVSEESRP----CEGVLRDCEEFGEWKEW 767

  Fly   898 NAPASPYKRRNYHKPYPPEIPRPPPPASASLIALDRSSSSE---SEWVAHPGCHSNC-------- 951
            .: .|........|.:.|.:   ....|:..:..:|...:|   :.|.....|..:|        
 Worm   768 GS-CSEKCALGVQKRFRPCL---TDQCSSKHLQEERPCDNEGCWTNWDEWSSCSQSCGGGRRYRI 828

  Fly   952 -------------MTDSKGVQGVTSRLTG--VESIQLCSYRIQPCERL------QTAAEYA---- 991
                         ..:|...|...|:..|  :.....|....|..|||      .||.:.|    
 Worm   829 RKCLDDKCDGDDLEKESCNTQKCISQSWGDWLPCSVSCGIGFQIRERLCDGELCATANKQARTCN 893

  Fly   992 EQTC-ARYRQKVRGLSGHGAQISASIDE----PDRSCRVG-CQDEFIKYRYYLVNGRNGH----F 1046
            :|.| :.:...|....|.....||:..|    .:||||.| |.::........|||...|    :
 Worm   894 QQQCPSAFSLSVWSEWGEWTTCSATCGEGLQSRERSCRRGSCTEDDASQTRRCVNGPCEHSYLTW 958

  Fly  1047 PPGTRCSP---------VGKRYCVYGRCLEFGDD---DLPLDKTHISLGQLRTRRKRSSISNDL- 1098
            ...|.|..         :.|.......|.:..|:   |:...:...|.|.:..||.:...|||| 
 Worm   959 SEWTTCETCSSFDSRKRIAKCDGTTENCQDKIDEETCDIACLREKHSFGPISPRRPKLITSNDLR 1023

  Fly  1099 --FNITEIFIKPSHSD 1112
              |....:.|:..||:
 Worm  1024 KAFGRPLLPIESIHSE 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 20/92 (22%)
ZnMc_ADAMTS_like 331..543 CDD:239801 75/220 (34%)
Reprolysin 332..545 CDD:279729 76/221 (34%)
TSP1 683..741 CDD:214559 19/63 (30%)
adt-1NP_510116.2 Pep_M12B_propep <64..163 CDD:307618 24/110 (22%)
ZnMc_ADAMTS_like 234..448 CDD:239801 76/221 (34%)
TSP1 710..752 CDD:214559 5/45 (11%)
PTZ00441 <762..>806 CDD:240420 7/47 (15%)
TSP1 807..851 CDD:214559 5/43 (12%)
TSP1 855..898 CDD:214559 10/42 (24%)
TSP1 906..952 CDD:214559 13/45 (29%)
TSP1 1041..1082 CDD:214559
TSP_1 <1088..1135 CDD:326556
TSP1 1151..1200 CDD:214559
TSP1 1206..1257 CDD:214559
TSP1 1268..1318 CDD:214559
TSP1 1327..1378 CDD:214559
TSP1 1385..1435 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 162 1.000 Domainoid score I2423
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D115377at33208
OrthoFinder 1 1.000 - - FOG0012725
OrthoInspector 1 1.000 - - otm14430
orthoMCL 1 0.900 - - OOG6_117889
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X10543
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.680

Return to query results.
Submit another query.