DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and Adamts6

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001074489.1 Gene:Adamts6 / 108154 MGIID:1347348 Length:1117 Species:Mus musculus


Alignment Length:1128 Identity:261/1128 - (23%)
Similarity:399/1128 - (35%) Gaps:330/1128 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PGEAEQHGG-------NPHQRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEA-----RLQLQQSPQ 163
            |...:|:|.       |....|:|||:..      |.|::...:....:.|     .|.|..:..
Mouse    47 PIRVDQNGAFLSFTVKNDKHSRRRRSMDL------LDPQQAVSKLFFKLSAYGKHFHLNLTLNTN 105

  Fly   164 LIDDAFIFIRRTENGTQFVEHSPQLLKRLERCFY--------RSPAAALDLCEPGNVRGVFQQNG 220
            .:...|......::|.|: :|.     .|:.|.|        .:...||..|.  .:.|:.....
Mouse   106 FVSKHFTVEYWGKDGPQW-KHD-----FLDNCHYTGYLQDQHSTTKVALSNCV--GLHGIIATED 162

  Fly   221 SDLVIHPLP--------ARFGTG-THVLY-------QARVDKSGGGYSEASSRRTASPLDSQLQF 269
            .:..|.||.        ..:..| .||:|       |...|.|..|.|:.:.......|:....|
Mouse   163 EEYFIEPLKNTTEDSKHFSYENGHPHVIYKKSTLQQQHIYDHSHCGVSDLTGSGKPWWLNKTSSF 227

  Fly   270 EPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPRSRWSDIPEELFIE 334
             |.....|:                         .|.||::||             .:..|.|:|
Mouse   228 -PSLPPIND-------------------------THIHHRKRR-------------SVSTERFVE 253

  Fly   335 TAIFVDSDLYA-HMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSWDP 398
            |.:..|..:.. |.:|:        :..::|:::|.|..||...:||..:|.::.|| |..:.|.
Mouse   254 TLVVADKMMVGYHGRKD--------IEHYILSVMNIVAKLYRDSSLGNVVNIIVARL-IVLTEDQ 309

  Fly   399 PGLVRSRDVENYLNSFCKWQEK-LNPFSDADPL------HYDHALVLTGLDLVTYDKGKANSQVV 456
            |.|..:...:..|:||||||:. |:..||.:.:      |:|:|:::|..|:.||......:  :
Mouse   310 PNLEINHHADKSLDSFCKWQKSILSHQSDGNTIPENGIAHHDNAVLITRYDICTYKNKPCGT--L 372

  Fly   457 GMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISCDPTMHIMSPKLGSGKVT 521
            |:|:|.|||....||:|||.....|.|.:|||||||.||.||....||....| .:.||.:..:|
Mouse   373 GLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNSCGTKGH-EAAKLMAAHIT 436

  Fly   522 -------WSKCSRTYLEDFLMDPQAECLFDRDSFAGPWDHTAGGRLPGERFNANQQCMLRFGKNF 579
                   ||.|||.|:..||...:..||   |:.....|.......||:.::|::||..::|   
Mouse   437 ANTNPFSWSACSRDYITSFLDSGRGTCL---DNEPPKRDFLYPAVAPGQVYDADEQCRFQYG--- 495

  Fly   580 MQASTQSKM-EICRDLHC--RQDGLPWTSHPALEGTECGPNM----WCRGGTCEARSSKQGSYSA 637
             ..|.|.|. |:||:|.|  :.:.....|.||.|||.|....    ||..|.|          ..
Mouse   496 -ATSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTGNIEKGWCYQGDC----------VP 549

  Fly   638 LKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSR 702
            ..:||                               ..:.|   .||.||         |:|:..
Mouse   550 FGTWP-------------------------------QSIDG---GWGSWS---------LWGECS 571

  Fly   703 RLLEGSTGLRTLNRSCLN-FPS----RCIGRDRRFVTCNTPQCHKVPVQTINDFATQVC-----M 757
            |...|  |:.:..|.|.: .||    .|:|..:|:.:|||..|   |:.: .||..:.|     |
Mouse   572 RTCGG--GVSSSLRHCDSPAPSGGGKYCLGERKRYRSCNTDPC---PLGS-RDFREKQCADFDSM 630

  Fly   758 QARKSD---PELTGEGQQLPSTLDASCKIFCRTR-TNGTKSRRWTFPDGTTCKAKQHNPEDITYC 818
            ..|...   ...||.|.:       .|.:.|... .|....|.....|||.|     |.:.:..|
Mouse   631 PFRGKHYNWKPYTGGGVK-------PCALNCLAEGYNFYTERAPAVIDGTQC-----NADSLDIC 683

  Fly   819 ISGRCERFSCDNSTSNFFKM--------DSSFCEA---------------RSVRPTRDSSDQESR 860
            |:|.|:...|||...:..:.        |.|.|:|               ..|:..|.|...|.|
Mouse   684 INGECKHVGCDNILGSDAREDRCRVCGGDGSTCDAIEGFFNDSLPRGGYMEVVQIPRGSVHIEVR 748

  Fly   861 QQTNRQRY-AERQEGKPQKNHYENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPPEIPRPPPPA 924
            :.:..:.| |.:.||   .::|.|. |....:.:...::..|..|||....    ||......|.
Mouse   749 EVSMSKNYIALKSEG---DDYYING-AWTIDWPRKFDVSGTAFHYKRPTDE----PESLEALGPT 805

  Fly   925 SASLIA------------------LDRSSSSESE----WVAHP--GCHSNCMTDSKGVQGVTSRL 965
            |.:||.                  :.|:.|.::|    |...|  .|.:.|....:..:.|..||
Mouse   806 SENLIVMVLLQEQNLGIRYKFNVPIVRTGSGDNEVGFMWTYQPWAECSATCAGGVQRQEVVCKRL 870

  Fly   966 TGVESIQ--LC-----------SYRIQPCERLQTAAEYAE--QTC---ARYR-----QKVRGLSG 1007
            .....:|  .|           :...:||.......::.|  :||   .|.|     :||     
Mouse   871 DDNSIVQNNFCDPDSKPPENQRACNTEPCPPEWFIGDWLECSKTCDGGMRTRAVLCIRKV----- 930

  Fly  1008 HGAQISASIDEPD---------RSC-RVGCQDEFI---------------KYRYYLVNGRN-GHF 1046
             |.....::|..|         .|| ...|..:::               |:|..|....: ...
Mouse   931 -GPSEEETLDYGDCLTHRPVEKESCNNQSCPPQWVALDWSECTPKCGSGFKHRIVLCKSSDLSKT 994

  Fly  1047 PPGTRC----SPVGKRYCVYGRC 1065
            .|..:|    .|..:..|..|||
Mouse   995 FPAAQCPEESKPPARIRCSLGRC 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 18/100 (18%)
ZnMc_ADAMTS_like 331..543 CDD:239801 76/226 (34%)
Reprolysin 332..545 CDD:279729 77/227 (34%)
TSP1 683..741 CDD:214559 19/62 (31%)
Adamts6NP_001074489.1 Pep_M12B_propep 43..191 CDD:366707 30/157 (19%)
ZnMc_ADAMTS_like 250..465 CDD:239801 77/229 (34%)
ADAM_CR_2 480..548 CDD:375321 25/81 (31%)
TSP1 561..613 CDD:214559 20/65 (31%)
ADAM_spacer1 719..829 CDD:368694 22/117 (19%)
TSP1 843..900 CDD:214559 10/56 (18%)
TSP1 902..960 CDD:214559 12/63 (19%)
TSP1 1022..1069 CDD:214559
PLAC 1083..1115 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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