DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and adamts3

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_021331662.1 Gene:adamts3 / 102467218 ZFINID:ZDB-GENE-110223-1 Length:1192 Species:Danio rerio


Alignment Length:876 Identity:223/876 - (25%)
Similarity:332/876 - (37%) Gaps:238/876 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 HLAQQRPEEQQRLEER-KRPG-------EAEQH------GGNPHQRRQRRSLPSEDGNGPLPPEE 143
            |||.:..:::..|:.| |..|       :||.|      ..|..||.:|..|   :|:.|.|...
Zfish    21 HLAGEIIDKEDLLKNRLKEYGLITPISTDAEGHFLSHFLSANHKQRVKRDVL---EGSAPAPDRL 82

  Fly   144 EEQEAGEDVEARLQLQQSPQLI---------DDAFIFIRRTENGTQFVEHSPQLLKR---LERCF 196
            .........|..|:|..:.:|:         ||..|....|:|.|    |..::|||   ...|.
Zfish    83 FFNITVFGKEFHLRLHPNQRLVAPGAMVEWHDDIEIAGNATDNRT----HFERILKRELLKTDCT 143

  Fly   197 YRS-----PAAALDLCEPGNVRGVFQQNGSDLVIHPLPARFGT-------GTHVLYQARVDKSGG 249
            :..     |.|::.:.....:.|:.:.:..:..|.||..  ||       ..||:|         
Zfish   144 FIGDITDVPGASVAINNCDGLAGMIRTDSDEYFIEPLEQ--GTQEHEERGRVHVVY--------- 197

  Fly   250 GYSEASSRRTA---SPLDSQLQFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQR 311
                   ||:|   :|.|..|.::|...|.:.||.......|:...:                 |
Zfish   198 -------RRSAVLQTPSDISLDYQPIEPELDTPRMLDNIAKQVNKTV-----------------R 238

  Fly   312 RRRYIGDAPRSRWSDIPEELFIETAIFVDSDLYAHMQKNFPTNTESKVVSFLLAMINGVQLLYHH 376
            |||:.||          |:..||..:.||..:.....|       ..|.::||.::|.|..:||.
Zfish   239 RRRHAGD----------EDYNIEILLGVDDSVVRFHGK-------EHVQNYLLTLMNIVNEIYHD 286

  Fly   377 PTLGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKW---QEKLNPFSDADPLHYDHALVL 438
            .:|...||.||.|:.:........|:...:....|.:.|:|   |:|.:|....   |:|||:.|
Zfish   287 ESLEVHINVVLVRMIMLGYAKSISLIERGNPSRSLENVCRWAFVQQKEDPEHSE---HHDHAIFL 348

  Fly   439 TGLDLVTYDKGKANSQVVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEIS 503
            |       .:|...:.:.|.|.|.|||..:.|||:|....|.|.||||||.||.|||.||.:...
Zfish   349 T-------RQGFGPTGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNR 406

  Fly   504 C-DPTM--HIMSPKLGSG--KVTWSKCS----RTYLEDFLMDPQAECLFDRDSFAGPWDHTAGGR 559
            | |.|.  .:|:|.:.:.  :..||.||    :.|:..:      :||.| |.|...|....  .
Zfish   407 CGDETAMGSVMAPLVQAAFHRYHWSMCSGQELKRYIHSY------DCLLD-DPFKHDWPQLP--E 462

  Fly   560 LPGERFNANQQCMLRFGKNFMQASTQSKMEICRDLHCRQDGLPW----TSHPALEGTECGPNMWC 620
            |||..::.::||...||..:...::....:.|:.|.|.....|:    ...|.|:||||.|..||
Zfish   463 LPGINYSMDEQCRFDFGVGYKICTSFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDGTECAPGKWC 527

  Fly   621 RGGTCEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGE 685
            ..|.|..:::.|                      ::.:                      ..||.
Zfish   528 YKGHCMWKNANQ----------------------VKQD----------------------GAWGA 548

  Fly   686 WSEPSACESGCLYGQSRRLLEGSTGLRTLNRSCLN-FPSR----CIGRDRRFVTCNTPQCHKVPV 745
            ||:..:|...|           ..|:|...|.|.| .||.    |.|.:..:..|||..|.|   
Zfish   549 WSKYGSCSRSC-----------GMGVRFRTRQCNNPVPSNGGQDCPGVNYEYQLCNTDDCPK--- 599

  Fly   746 QTINDFATQVCMQARKSDPEL-TGEGQQLP-STLDAS--CKIFCRTRTNGTKS-RRWTFPDGTTC 805
             ...||..|.| |.|.|..|. ..:...|| ...||:  |.::|:::..|..: .:....|||.|
Zfish   600 -HFEDFRAQQC-QLRNSHFEYQNAKHHWLPYEHPDANKRCHLYCQSKETGDVAYMKQLVHDGTRC 662

  Fly   806 KAKQHNPEDITYCISGRCERFSCDNST-SNFFKM---------DSSFCEARSVRPTRDSSDQESR 860
            ..|  :|..|  |:.|.|.:..||... ||  |:         |:|.|  |:|:.|         
Zfish   663 SYK--DPYSI--CVRGECVKVGCDREIGSN--KVEDKCGVCGGDNSHC--RTVKGT--------- 710

  Fly   861 QQTNRQRYAERQEG-----KPQKNHYENEVA 886
             .|...:.|.:..|     |..:|.|.||.|
Zfish   711 -FTRVPKKAGKTRGAFLLPKGARNVYLNETA 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 23/107 (21%)
ZnMc_ADAMTS_like 331..543 CDD:239801 68/223 (30%)
Reprolysin 332..545 CDD:279729 69/224 (31%)
TSP1 683..741 CDD:214559 18/62 (29%)
adamts3XP_021331662.1 Pep_M12B_propep 42..197 CDD:307618 36/163 (22%)
ZnMc_ADAMTS_like 248..449 CDD:239801 68/223 (30%)
TSP1 546..598 CDD:214559 18/62 (29%)
ADAM_spacer1 705..847 CDD:310520 12/46 (26%)
TSP1 926..984 CDD:214559
TSP1 987..1033 CDD:214559
PLAC 1040..1068 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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