DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and adamtsl3

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_003198947.5 Gene:adamtsl3 / 100534944 ZFINID:ZDB-GENE-121030-8 Length:1759 Species:Danio rerio


Alignment Length:588 Identity:124/588 - (21%)
Similarity:178/588 - (30%) Gaps:228/588 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 WGEWSEPSACESGCLYGQSRRLLEGSTGLRTLNRSCLNFPSRCIGRDRRFVTCNTPQCHKVPVQT 747
            ||.||:   |...|..|.|..|           |.||| ...|.||:.|:.||:...|   |:::
Zfish    81 WGTWSD---CSRTCGGGASYSL-----------RRCLN-GGNCEGRNIRYRTCSNTDC---PLES 127

  Fly   748 INDFATQVCMQARKSDPELTGEGQQ-LPSTLD--ASCKIFCRTRTNGTKSRRWTFP---DGTTCK 806
             .||..|.|  :..:|.:..|:..: :|.|.|  :.|.:.|:.|..|....  ..|   |||.||
Zfish   128 -GDFRAQQC--SAHNDIKYQGQTYEWIPVTYDPISPCALRCQARGKGQVVE--LAPKVLDGTRCK 187

  Fly   807 AKQHNPEDITYCISGRCERFSCDNSTSNFFKMDS--------SFCE------------------- 844
            |     :.:..||||.|:...||....:..|.|:        |.|.                   
Zfish   188 A-----DSLDMCISGICQEVGCDRQLGSNAKEDNCGVCAGDGSTCRLIRGQALPHVSPEEPIKTV 247

  Fly   845 ------ARSVRPTRDSSDQ---ESRQQTNR---------------------QRYAERQE------ 873
                  :|.:|.|....|.   |:..|.:|                     ||.||||.      
Zfish   248 IEVPMGSRGLRITAKGPDMIVIEAHGQNSRREEVHFSSSGSHSLGNNTVEFQRGAERQTLRCYGP 312

  Fly   874 -----------GKP----------QKNHYE-NEVAKRP---SYGQGNHINAPASPYKRRN----Y 909
                       ..|          |...|: .|....|   :.|.|..:|:......|.|    .
Zfish   313 LTADFTVKVKYAGPKDTVIQFMFYQPIRYQWRETDFFPCSVTCGGGYQLNSADCVDIRYNRSVAE 377

  Fly   910 HKPYP-PEIPRPPPPASASLIALDRSSSSESE----------------WVAHP--GCHSNCMTDS 955
            |..:. ||..:|.|    .|...:.....||:                |..:|  .|..:|...|
Zfish   378 HLCHSFPENTKPTP----KLKECNMEPCPESDGFKEVMPYDHFQPLPRWEQNPWTSCSVSCGGGS 438

  Fly   956 KG------VQGVTSRLTGVESIQLCSYRIQPCERLQ---------TAAEYAE--QTCA---RYR- 999
            :.      .:.|..::..||..: |::..:|..:..         .|.|:::  .||.   ||| 
Zfish   439 QERSIVCVEEDVHGQIVQVEDWK-CTHSPRPISKQNCNTFDCPQWMAMEWSQCTVTCGPGLRYRV 502

  Fly  1000 --------QKVRGLSGH--------------------GAQISAS--------------------- 1015
                    |...|.:.|                    ...:.|.                     
Zfish   503 VLCVDYNGQHAGGCNPHLKPHIKEDCLVPIACHKPRENQPVEAKLPWLKQAQELEETKVALEDPT 567

  Fly  1016 -IDEPDRSCRVGC----QDEFIKYRYYLVNGRNGHFPPGTRC---SPVGKRYCVYGRCLEFGDDD 1072
             :.||..||.|.|    |...:|.:..|...:.....|...|   .|..:|.|..|.||...|..
Zfish   568 FVPEPWSSCSVSCGLGIQRRQVKCKVLLSFTQAEVELPDEECHEEKPSSQRSCDSGPCLAAPDSR 632

  Fly  1073 LPL 1075
            .||
Zfish   633 WPL 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801
ADAMTS_CR_2 561..625 CDD:465496
TSP1 683..741 CDD:214559 19/57 (33%)
adamtsl3XP_003198947.5 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.