DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and adamts12

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_017946319.2 Gene:adamts12 / 100380018 XenbaseID:XB-GENE-959575 Length:1569 Species:Xenopus tropicalis


Alignment Length:1250 Identity:267/1250 - (21%)
Similarity:413/1250 - (33%) Gaps:410/1250 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 HGGNPH-----QRRQRRSLP-----------SEDGN---GPLPPEEEEQEAGEDVEARL------ 156
            |..|||     |.....|||           .|.||   ..|....:...|.:.:..|:      
 Frog    42 HRDNPHSLHKGQEHLDHSLPLAFEVVEPVKVDEKGNFLSYNLQHRRKRSVASQAIHYRIHHKTHN 106

  Fly   157 ---QLQQSPQLIDDAFIFIRRTENGTQFVEHSPQLLKRLERCFYRSPAAALDLCEPGNVRGVFQQ 218
               .|......:.|.||..||..|.:. ...||||                              
 Frog   107 LFFNLTFRDGFLSDNFILERRNGNSSH-ARISPQL------------------------------ 140

  Fly   219 NGSDLVIHPLPARFGTGTHVLYQARVDKSGGGYSEASSRRTASPLDSQLQFEPDAEEFNEPRRRL 283
                          |.|.|::..|:....|||.:..|   ..:.|....:. ||.:.|.||   .
 Frog   141 --------------GNGCHLIGTAQRAHVGGGVAAIS---VCNGLAGFFRL-PDGDYFIEP---F 184

  Fly   284 RAQSQLQSPLRLRFQPRHHHPHQH--------HQQRRRRYI--GD---------------APRSR 323
            ...:|:..           .||||        |:.||...|  ||               ..|..
 Frog   185 HGATQVSG-----------KPHQHIIYQRDSPHRNRRELPISTGDFCAVNDNSKSVLQQERQREE 238

  Fly   324 WS------------DIPEELFIETAIFVDSDLYAHMQKNFPTNTESKVVSFLLAMINGVQLLYHH 376
            |.            .:.:|.::||.:..|:.:.|:...|       .|.|::..::|.|..|:|.
 Frog   239 WERKHLNGRKISQRSVSKERWVETLVVADTKMIAYHGSN-------NVESYIFTIMNMVTGLFHD 296

  Fly   377 PTLGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKWQEKLNPFSDADPLHYDHALVLTGL 441
            |.:|..|:..:.||.:.:. :..||....:.:..|.||||||:.:||.|||.|.|:|.|::||..
 Frog   297 PNIGNAIHIKVVRLILLEE-EEEGLKIVHNADQTLASFCKWQKSINPKSDAHPAHHDVAVLLTRK 360

  Fly   442 DLVTYDKGKANS--QVVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISC 504
            |:.    ...||  :.:|::.:.|||....||.|||.......|.:|||:||:.|::||.:...|
 Frog   361 DIC----ASKNSPCETLGLSHLSGMCQPSKSCNINEDTGLPLAFTIAHELGHSFGIQHDGQGNDC 421

  Fly   505 D---PTMHIMSPKL--GSGKVTWSKCSRTYLEDFLMDPQAECLFDRDSFAGPWDHTAGGRLPGER 564
            :   ...:|||.:|  .:..:|||.||:.|:..||......||   |......|.......||..
 Frog   422 EIAGRNPYIMSRQLQYNTSPLTWSPCSKEYITRFLDRGWGFCL---DDVPAKKDLKPPIIAPGVL 483

  Fly   565 FNANQQCMLRFGKNFMQASTQSKME-ICRDLHCR-QDGLPWTSHPALEGTECGPNMWCRGGTCEA 627
            ::.|.||.|::|.|   |:...::: :|:.|.|. ::........|.:||.||.:.||..|.|  
 Frog   484 YDVNHQCQLQYGPN---ATFCEEVDNVCQTLWCSVKNSCRSKLDSAADGTRCGESKWCFNGKC-- 543

  Fly   628 RSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSAC 692
                              |...|..:.|.                        ..||.|:..|.|
 Frog   544 ------------------INVGTTPQTIN------------------------GGWGAWTPWSHC 566

  Fly   693 ESGCLYGQSRRLLEGSTGLRTLNRSCLN----FPSR-CIGRDRRFVTCNTPQCHKVPVQTINDFA 752
            ...|           ..|.....|.|.|    |..: |.|..:|:..||...|.|       |:.
 Frog   567 SRTC-----------GAGAENAERKCNNPQPKFGGKYCTGERKRYRICNIQPCPK-------DYP 613

  Fly   753 TQVCMQARKSD--PELTGEGQQLP-STLDASCKIFCRTRTNGTKSRRW--TFPDGTTCKAKQHNP 812
            :...||..:.:  |......|.:| ...:..|::.||: ::|..:.::  ...|||.| .:::..
 Frog   614 SFREMQCTEFNTVPYKNELYQWIPIYNTENPCELHCRS-SSGNFANKFLDAVIDGTPC-FERNKS 676

  Fly   813 EDITYCISGRCERFSCD-----NSTSNFFKM---DSSFCEA-RSV----------------RPTR 852
            .|:  ||:|.|::..||     |:|.:...:   |.|.|:. :.|                :..|
 Frog   677 RDV--CINGICKKVGCDYEIDSNATEDRCGICLGDGSSCQTIKKVFNQTDGFGYVDVGLIPKGAR 739

  Fly   853 DSSDQESRQQTNRQRYAERQEGKPQKN------------------HYE--NEVAKRPSYGQGNH- 896
            |...:|..:..|.........||...|                  ||:  |:.....:.|..|. 
 Frog   740 DIKIEEVEEAGNFLALRSEDPGKYYLNGAYIIQWNGEYKVAGTIFHYQRNNDTENITASGPTNES 804

  Fly   897 -----INAPASPYKRRNYHKPYPPEIPRPPPPASASLIALDRSSSSESE---------WVAHPGC 947
                 :....:|..|..|                  :|..|.:..:|.|         |.   .|
 Frog   805 IWIQLLFQEHNPGVRYEY------------------VIQKDVNLENEIESVYTWRYGGWT---DC 848

  Fly   948 HSNCMTDSKGVQGVTSRLT----GVESIQLCSYRIQPCERLQTAA-------------EYAEQTC 995
            .:.|.|   |||...||..    ||.....|...:||..|.:...             :....||
 Frog   849 SATCGT---GVQHQISRCVNKKRGVVKNTFCDQEMQPITRQKKCNTKECPPRWWVGQWQQCSTTC 910

  Fly   996 ARYRQKVRGL-----SGHGAQISASID-----EPD--------------------RSCRVGCQDE 1030
            ....:|.|.:     ||...:...|.|     :|.                    ..|.|.|...
 Frog   911 GPTGEKKRTVLCLKTSGSDEEALRSEDCHHLTKPKVYLSCNRDILCPSDWTVSNWSECSVTCGGG 975

  Fly  1031 FIKYRYYLVNGRNGHFPPGTRCSPVGKRYCVYGRCL---------------------EFGDDD-- 1072
             ::.| .:...:|...|..:...|..|..|...:|.                     :.||..  
 Frog   976 -VRTR-NITCAKNNDEPCDSSKKPNSKALCGLQQCYVQKTLPKPPIKYNYRKKIIKKKSGDPKRR 1038

  Fly  1073 --LPLDKTH----------ISLGQLRTRRKRSSIS--------NDLFNITEIFIKPSHSDISAEN 1117
              || :|.|          :.:....|.....|:.        |::.|.|...|...::.:..||
 Frog  1039 IFLP-NKNHRVQTTTGLPRVFMSTSSTNSSSPSVKSIKEDFQINEIPNSTHFNIDYKYNFVLVEN 1102

  Fly  1118 IEFTQPIHVSADELS 1132
            .:  :.:||:|..:|
 Frog  1103 NK--RKVHVNATSIS 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801 71/218 (33%)
ADAMTS_CR_2 561..625 CDD:465496 20/65 (31%)
TSP1 683..741 CDD:214559 16/62 (26%)
adamts12XP_017946319.2 Pep_M12B_propep 65..200 CDD:460254 36/197 (18%)
ZnMc_ADAMTS_like 258..465 CDD:239801 72/221 (33%)
ADAMTS_CR_2 480..544 CDD:465496 21/86 (24%)
TSP1 557..609 CDD:214559 16/62 (26%)
ADAMTS_CR_3 615..713 CDD:437068 24/101 (24%)
ADAMTS_spacer1 715..824 CDD:461796 16/126 (13%)
TSP1_ADAMTS 840..894 CDD:465950 15/59 (25%)
TSP1_ADAMTS 898..952 CDD:465950 9/53 (17%)
TSP1_ADAMTS 960..1008 CDD:465950 9/49 (18%)
TSP1_ADAMTS 1312..1360 CDD:465950
TSP1_ADAMTS 1363..1418 CDD:465950
TSP1_ADAMTS 1421..1467 CDD:465950
TSP1_ADAMTS 1470..1525 CDD:465950
Blue background indicates that the domain is not in the aligned region.

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