DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and adamts12

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_021332071.1 Gene:adamts12 / 100003937 ZFINID:ZDB-GENE-070705-471 Length:1500 Species:Danio rerio


Alignment Length:1309 Identity:299/1309 - (22%)
Similarity:446/1309 - (34%) Gaps:427/1309 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 HLREHERALIFGSRSPEEAPEFKLVHLAQQRPE-EQQRLEERKRPGEAEQHGGNPH--QRRQRRS 129
            |::..|...:|        |:.:..|..:|..| .....|:....|:...:..:.|  :|||:|.
Zfish    22 HVKSSEPDYLF--------PDTEQEHFVKQHSEFYVDHPEKVNGEGKFISYALSHHFTRRRQKRD 78

  Fly   130 LPSED----------GNGPLPPEEEEQEAGEDVEARLQLQQSPQLIDDAFIFIRRTENGTQFVEH 184
            |.|.:          |.                |..|.|..:..|:.:.||..:|  ||: ..|.
Zfish    79 LNSAERRVYYKLNYRGR----------------ELTLNLTTNDNLLSNEFIVEKR--NGS-LAEK 124

  Fly   185 SPQ--------LLKRLERCFYRSPAAALDLCEPGNVRGVFQQNGSDLVIHPLPARFGTGT----- 236
            .||        |:..:.....:: .||:..||  .:||:.......|:|.|:..|....|     
Zfish   125 WPQSSDSGSCHLIGTVTDDNVQA-TAAISTCE--GLRGLLNLPEGPLLIEPVRGRSPNLTHPQHP 186

  Fly   237 HVLYQARVDKSGGGYSEASSRRT-----ASPL---DSQLQFEPDAEEFNEPRRRLRAQSQLQSPL 293
            |||||:..      :|....||:     .||.   ||...|:...::     |.|..:..:.   
Zfish   187 HVLYQSST------WSRFRQRRSIDAHQQSPCGVKDSSGYFQQVEQD-----RELWERESVD--- 237

  Fly   294 RLRFQPRHHHPHQHHQQRRRRYIGDAPRSRWSDIPEELFIETAIFVDSDLYAHMQKNFPTNTESK 358
                  |:|.|   ..:|.||.   :|||    |..|.::||.:..||.|..:       :....
Zfish   238 ------RNHRP---DPERPRRI---SPRS----ISRERWVETMVVGDSKLVDY-------HGSGS 279

  Fly   359 VVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSWDPPGLVRSRDVENYLNSFCKWQEKLNP 423
            |.|::..::|.|..::|..::|..|:.||.|| |....:..||......:..|.|||.||:.|||
Zfish   280 VESYIFTIMNMVAGIFHDASIGNAIHIVLVRL-ILLHGEEKGLKIIHHADTTLTSFCTWQKNLNP 343

  Fly   424 FSDADPLHYDHALVLTGLDLVTYDKG-KANSQVVGMATVKGMCTSIYSCTINEAKHFESVFVVAH 487
            .||..|.|:|.|:::|..|:..   | ....:.:|::.:.|||....||.|||.......|.:||
Zfish   344 QSDTHPAHHDVAILITRKDVCA---GMNQPCETLGLSHLSGMCQPHRSCNINEDSGLPVAFTIAH 405

  Fly   488 EIGHNLGMRHDAKEISCD---PTMHIMSPKL--GSGKVTWSKCSRTYLEDFLMDPQAECLFDRDS 547
            |:||:.|::||.:...|:   ....|||.:|  .|..:|||.||:.|:..||......||.||.|
Zfish   406 ELGHSFGIQHDGQGNDCEFVGKQPFIMSRQLQYDSSPLTWSSCSKEYITRFLDRGWGFCLDDRPS 470

  Fly   548 FAGPWDHTAGGRLPGERFNANQQCMLRFGKNFMQASTQSKME-ICRDLHCRQDGLPWTS-HPALE 610
               ..|.:..|..||.|:....||.|::|.|   |:..|::| :|:.|.|..:|...:. ...::
Zfish   471 ---KRDLSTPGAAPGVRYTPQHQCQLQYGPN---ATFCSEVENVCQILWCSVNGSCRSKLDSPID 529

  Fly   611 GTECGPNMWCRGGTCEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNE 675
            ||.|||..||..|.|.....               :||..|                        
Zfish   530 GTRCGPEKWCISGECVIVGK---------------LPETVH------------------------ 555

  Fly   676 LPGSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGLRTLNRSCLNFP------SRCIGRDRRFVT 734
                 ..||.||..|.|...|           ..|::|.:|.| |.|      ..|.|..:|:..
Zfish   556 -----GGWGPWSSWSHCSRTC-----------GAGVQTADREC-NQPKPEFGGKYCTGERKRYRV 603

  Fly   735 CNTPQCHKVPVQTINDFATQVCMQARKSDPELTGEGQQLP-STLDASCKIFCR-TRTNGTKSRRW 797
            |||..|    |:....|....|.:. .:.|......|.:| |:....|::.|: ...|.::....
Zfish   604 CNTKLC----VRKHPSFREMQCSEF-NTVPYHNELYQWIPVSSPSRPCELHCKPVDENFSEKMLD 663

  Fly   798 TFPDGTTCKAKQHNPEDITYCISGRCERFSCDNSTSNFFKMDS--------SFCEARSVRP---- 850
            ...|||.| ...:|..:|  |::|.|:...||...::..|.||        |.||  :|:.    
Zfish   664 AVTDGTPC-FMNNNSRNI--CVNGVCKEVGCDFGINSNAKEDSCGVCLGDGSTCE--TVKENFVE 723

  Fly   851 ---------------TRDSSDQESRQQTN-------------------RQRYAERQEGKPQKNH- 880
                           .||...||..:..|                   .|...|.:.|..:.|: 
Zfish   724 QDGFGYMDLVLIPAGARDIYIQEVEEAGNFLAMRASDSDEYYLNGNYIIQWNGEYEAGGTKFNYE 788

  Fly   881 --------------------------------YENEVAKRPSYGQGNHINAPASPYKRRNY---- 909
                                            ||..:.:|...  ||.|..|...:|...:    
Zfish   789 RSGNIENLTSAGPTTEPVMIQLLFQELNPGVKYEYTIKRRRPL--GNEILEPEYIWKHGAWTDCS 851

  Fly   910 --------HKP---YPPEI-----------PRP-------------------------------- 920
                    |:|   :.||:           .||                                
Zfish   852 TTCGLGEQHQPVRCFEPEVGVVEENLCDPSTRPDDKHRKCKSRDCPARWWVGGWQTCSSTCGSTG 916

  Fly   921 -----------------------------PPPASASLIALDRSSSSESEWVAHPGCHSNCMTDSK 956
                                         |.||    :..:|.....|||..  |..|.|.....
Zfish   917 VKKRTILCVRTVAGEERVLHPGDCKQLLKPKPA----VPCNRDVPCGSEWTV--GNWSECSQSCD 975

  Fly   957 GVQGVTSRLTGVESIQLCSYRIQPCER--------LQTAAEYAEQTCARYRQKVRGLSGHG---A 1010
            |  |:.||:  |:.:.....|..|..|        ||:.:.....|..|:|.:.......|   .
Zfish   976 G--GIKSRM--VKCVAKQPSRCNPATRPRSTILCNLQSCSSTNRWTGPRFRPRKIPTQPPGTQTT 1036

  Fly  1011 QISASIDEPDRSCRVGCQD--------------EFIKYRYYLVNGRNGHFPPGTRCSPVGKRYCV 1061
            |.|.:|..|:.|..:..|.              :||     ||...|...|..|..         
Zfish  1037 QYSPTITPPNTSTPITTQSNTSPTSDIIHEDDKDFI-----LVKKNNVAVPTITED--------- 1087

  Fly  1062 YGRCLEFGDDDL-PLDKTHISLGQLRTRRKRSSISNDLFNITEIFIKPSHSDISAENIEFTQPIH 1125
                 |.|..|| |.||:: :.|............:|||.     .||....||:     .|||.
Zfish  1088 -----EEGSTDLQPPDKSY-TPGYDYIEDPERIREDDLFT-----SKPEEVLISS-----VQPIT 1136

  Fly  1126 VSADELSSK 1134
            :||...::|
Zfish  1137 MSAPVSTTK 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848 24/96 (25%)
ZnMc_ADAMTS_like 331..543 CDD:239801 70/217 (32%)
Reprolysin 332..545 CDD:279729 71/218 (33%)
TSP1 683..741 CDD:214559 19/63 (30%)
adamts12XP_021332071.1 Pep_M12B_propep 51..190 CDD:307618 36/160 (23%)
ZnMc_ADAMTS_like 259..466 CDD:239801 70/217 (32%)
ADAM_CR 529..689 CDD:326582 51/223 (23%)
TSP1 558..609 CDD:214559 19/62 (31%)
ADAM_spacer1 715..825 CDD:310520 13/111 (12%)
TSP1 960..1011 CDD:214559 16/56 (29%)
TSP_1 1358..1401 CDD:326556
TSP1 1404..1458 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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