DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYCB2;4

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001323249.1 Gene:CYCB2;4 / 843964 AraportID:AT1G76310 Length:459 Species:Arabidopsis thaliana


Alignment Length:497 Identity:139/497 - (27%)
Similarity:222/497 - (44%) Gaps:102/497 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LGSTNGNGNGAV-PPKVNEGGVSAFLRSNSVRNRVPTKTTVEPTKVTVKSSSSENVNEPTLKRED 150
            :|.::.|.:|.: |....:||    ||...|   :||                   |..| :|..
plant     1 MGGSDENRHGVIGPMNRQQGG----LRGGKV---IPT-------------------NGQT-RRAL 38

  Fly   151 SNLSKKSL--TKLRAALAKPVMGVSGI---RREPVAVSRKEAETKKELPETKKDSLEVKKDATRM 210
            ||::|..:  .....|:.:|....:||   :..||.|.|  ..|:|...:..:::|::.|:.|:.
plant    39 SNINKNIIGAPVYPCAVKRPFTEKNGICNKKIPPVPVHR--PVTRKFAAQLAENNLQIHKEETKK 101

  Fly   211 PLIRGNSAVTTTTSTM-------------PTTMSLSSKRLAGIE----------------DIDAN 246
            |.:..|.|:....:.:             ...|.....::.|||                |||:.
plant   102 PDLISNEALDRIITDVEEGDFNEPMFVQHTEAMLEEIDKMEGIEMQDSNDIDAEVEESVMDIDSC 166

  Fly   247 DKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETF 311
            ||.|.:.|.||:||||.:..:.|....:..:::..|.:::.:||.:|.||:.|||.:|.|..||.
plant   167 DKNNPLSVVEYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGILFDWLIEVHYKFELMEETL 231

  Fly   312 QLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQM-- 374
            .|.:.:|||:|.|.:...|..||||||||:.:|.||||:..|.:.|.:.|:|..||..:|..|  
plant   232 YLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSVPVVDDLILISDKAYTRTEILDMVK 296

  Fly   375 --------------------------ELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSK 413
                                      |..:...:..|...|.|..|:||:.|||.::.:...:|.
plant   297 SFTKSCPDYNHGCSALYVDDHYCVLQEKLMANTLQFNFCLPTPYVFMRRFLKAAQSDKKLELLSF 361

  Fly   414 YFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPI 478
            :.|||..|:|||..|.||::||::::.:...|.       |:.|  |:.|..|:|.|:...|...
plant   362 FMIELCLVEYEMLQYTPSQLAASAIYTAQSTLK-------GYED--WSKTSEFHSGYTEEALLEC 417

  Fly   479 TRLIAKLARDAPQAKLKAIYNKYQGSKFQKIALRTELTGALM 520
            :|.:..|...|...||..::.||..||| ..|.|.|..|.|:
plant   418 SRKMVGLHHKAGTGKLTGVHRKYNTSKF-GYAARIEPAGFLL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 47/154 (31%)
Cyclin_C 389..515 CDD:281044 42/125 (34%)
CYCB2;4NP_001323249.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I1359
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3050
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.730

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