DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYCA3;4

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_973983.1 Gene:CYCA3;4 / 841126 AraportID:AT1G47230 Length:370 Species:Arabidopsis thaliana


Alignment Length:407 Identity:119/407 - (29%)
Similarity:196/407 - (48%) Gaps:65/407 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SENVN-----EPTLKREDSN--LSKKSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPE 195
            :||.|     ....||:.|:  |.:..::|.|..|.: :..:|.:    |||..:|.||.|    
plant     2 AENQNCARMTRAAAKRKASSMALDENPVSKKRVVLGE-LPNMSNV----VAVPNQERETLK---- 57

  Fly   196 TKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIEDIDANDKENLVLVSEYVND 260
             .|.|:...|...:..|:            :|....|...|     .:|..      :...:.:|
plant    58 -AKTSVNTSKRQMKKALM------------IPEASVLIESR-----SVDPQ------MCEPFASD 98

  Fly   261 IYDYLYQVELEQPIHK---DHLAG-QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRY 321
            |..||.::| .:|.|:   |::.. |.:::..|||||:||:.||..::.|.::|..|.::.:||:
plant    99 ICAYLREME-GKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRF 162

  Fly   322 LQVVKDTKRTYLQLVGVTALFIAT-KYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCN 385
            |. ||...|..||||||:|:.||: ||||:.||.:.||.:|||:|:|.:::..||..|..|:...
plant   163 LS-VKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFE 226

  Fly   386 LSRPLPIHFLRRYSKAAGAED------EHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHL 444
            |..|....||||:::.| .||      :...:..|..||:.:||....|.||.::|:::||:..:
plant   227 LGSPTIKTFLRRFTRVA-QEDFKDSQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFI 290

  Fly   445 LNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKI 509
            :......        |...|..|::|.||.|:....:|..|........|:|:.|||:..|::.:
plant   291 IRPKQHP--------WNQMLEEYTKYKAADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCV 347

  Fly   510 A---LRTELTGALMDSI 523
            |   :..||..|..:.|
plant   348 ATMPVSPELPLAFFEDI 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 53/134 (40%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 34/125 (27%)
CYCA3;4NP_973983.1 CYCLIN_AtCycA_like_rpt1 88..226 CDD:410265 54/145 (37%)
CYCLIN_AtCycA-like_rpt2 230..344 CDD:410210 33/122 (27%)

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