DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYCB2;3

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_173485.1 Gene:CYCB2;3 / 838650 AraportID:AT1G20610 Length:429 Species:Arabidopsis thaliana


Alignment Length:436 Identity:132/436 - (30%)
Similarity:214/436 - (49%) Gaps:43/436 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SAFLRSNSVRNRVPTKTTVEPTK---------VTVKSSSSENVNEPTLKREDSNLSKKSL----- 158
            |..|:...|..::.|..|..||:         :|...|....||:.::...|...:|..:     
plant    14 SMSLQGGGVVGKIKTTATTGPTRRALSTINKNITEAPSYPYAVNKRSVSERDGICNKPPVHRPVT 78

  Fly   159 TKLRAALA--KPVMGVSGIR----REPVAVSRKEAET-KKELPETKKDSLEVKKDATRMPLIRGN 216
            .|..|.||  ||     .||    ::|.:||.:|.|| ..::.|:.|:.    .|:.....::..
plant    79 RKFAAQLADHKP-----HIRDEETKKPDSVSSEEPETIIIDVDESDKEG----GDSNEPMFVQHT 134

  Fly   217 SAVTTTTSTMPTTMSL--SSKRLAGIEDIDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHL 279
            .|:......|...:.:  :.|....:.||||.||.|.:...||::|::.:....|....:..:::
plant   135 EAMLEEIEQMEKEIEMEDADKEEEPVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYM 199

  Fly   280 AGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIA 344
            ..|::::.:||.:||||:.|||.:|.|..||..|.:.:|||:| .|....|..|||||||||.:|
plant   200 DNQQDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFL-AVHQIVRKKLQLVGVTALLLA 263

  Fly   345 TKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHH 409
            .||||:..|.:.|.:.|:|..|:.|::..||..:...:..|.|.|.|..|::|:.|||.::.:..
plant   264 CKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKKLE 328

  Fly   410 TMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAH 474
            .:|.:.|||..|:|||..|.||::||::::.:...|.       ||.:  |:.|..|::.|:...
plant   329 ILSFFMIELCLVEYEMLEYLPSKLAASAIYTAQCTLK-------GFEE--WSKTCEFHTGYNEKQ 384

  Fly   475 LRPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKIALRTELTGALM 520
            |....|.:......|...||..::.||..|||.. |.|||..|.|:
plant   385 LLACARKMVAFHHKAGTGKLTGVHRKYNTSKFCH-AARTEPAGFLI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 46/126 (37%)
Cyclin_C 389..515 CDD:281044 40/125 (32%)
CYCB2;3NP_173485.1 Cyclin_N 180..304 CDD:278560 45/124 (36%)
Cyclin_C 308..425 CDD:281044 41/126 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I1359
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3050
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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