DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYCB3;1

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_173083.3 Gene:CYCB3;1 / 838202 AraportID:AT1G16330 Length:648 Species:Arabidopsis thaliana


Alignment Length:529 Identity:141/529 - (26%)
Similarity:230/529 - (43%) Gaps:88/529 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ATTKRAALGDLQNRGISRPIAAKDAAQKDSKDLKLTDALRNAKARVDSHWKKQPLGSTNGNGNGA 97
            |..||.::|..:...||...:.|:...|.:.:|...:..:..:..:.:  |...||||.|....:
plant   129 ANPKRVSVGPTRANNISVKKSTKENVSKRTTELGNNNLYKTGQKFIKN--KTLSLGSTAGGTRKS 191

  Fly    98 VP------------PKVNEGGVSA-----FLRSNSVRNRVP-----------TKTTVEPTKVTVK 134
            :|            .|.|..|:::     .|.|.:....||           |:|:|...:....
plant   192 LPTLKRTSLTDKSLKKFNVSGLNSKQLGQGLASKASNQAVPQLSSAGTYTWKTRTSVGSIQSDGN 256

  Fly   135 SSSSENVN--------EPTLKREDSNLSKKSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKK 191
            ..|..||.        :.|:|....|         |::|.||.:|.|..|......|...|.| .
plant   257 KQSKNNVRFVRKSIKIQTTVKTSLQN---------RSSLKKPPVGRSKSRSISSIPSSAVAST-L 311

  Fly   192 ELPETKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIEDIDAN---------- 246
            .||| |.::..:::|........||.  ..||..:..|....|||......:..|          
plant   312 SLPE-KVETKCLEEDTQGESSSSGNK--DPTTKVLDVTAKPKSKRRKSFTSLLVNGSKFDEKNGE 373

  Fly   247 -----------DKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEV 300
                       |:.|.:.|:|||:|||.:.:..|...|....:|:...|||...|.:||:|:.||
plant   374 TTEPEKLPSIDDESNQLEVAEYVDDIYQFYWTAEALNPALGHYLSAHAEVSPVTRGILINWLIEV 438

  Fly   301 HLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDT 365
            |.:|.|..||..|.:.::||||..|...|.. :||:|:|||.:|:|||:.:.|.|.|.:.|:.::
plant   439 HFKFDLMHETLYLTMDLLDRYLSQVPIHKNE-MQLIGLTALLLASKYEDYWHPRIKDLISISAES 502

  Fly   366 YTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDYEMATYRP 430
            ||..||..||..:.|.:...|:.|.|..|:.|:.|||.:..:...::.|.|||..|:||...|:|
plant   503 YTREQILGMERSMLKQLKFRLNAPTPYVFMLRFLKAAQSNKKLEQLAFYLIELCLVEYEALKYKP 567

  Fly   431 SEIAAASLFL---SLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAPQA 492
            |.:.|:::::   :||:            ...||..|..::.|:.:.::..:.:|.:..:.|...
plant   568 SLLCASAIYVARCTLHM------------TPVWTSLLNNHTHYNVSQMKDCSDMILRFHKAAKTG 620

  Fly   493 KLKAIYNKY 501
            .|:..|.||
plant   621 NLRVTYEKY 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 48/126 (38%)
Cyclin_C 389..515 CDD:281044 30/116 (26%)
CYCB3;1NP_173083.3 CYCLIN_CCNB1-like_rpt1 392..521 CDD:410211 52/129 (40%)
CYCLIN_AtCycB-like_rpt2 526..642 CDD:410215 30/116 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I1359
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3050
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.730

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