DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYC1BAT

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_196233.1 Gene:CYC1BAT / 830502 AraportID:AT5G06150 Length:445 Species:Arabidopsis thaliana


Alignment Length:467 Identity:147/467 - (31%)
Similarity:231/467 - (49%) Gaps:75/467 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KARVDSHWKKQPL--GSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTVEPTKVTVKSSS 137
            :|.|....:..||  |....|.||||..:...|.:...:....|:.                ..:
plant     4 RANVPEQVRGAPLVDGLKIQNKNGAVKSRRALGDIGNLVSVPGVQG----------------GKA 52

  Fly   138 SENVNEPTLKREDSNLSKKSLTKLRAAL-------AKPVMG-----VSGIRREPVAVSRKEAE-- 188
            ...:|.|..:            ..||.|       .||:.|     ..|.:|:|:|....||:  
plant    53 QPPINRPITR------------SFRAQLLANAQLERKPINGDNKVPALGPKRQPLAARNPEAQRA 105

  Fly   189 -TKKEL---PETKK-DSLEVKKDATRMPLIRG--NSAVTTTTSTMPTTMSLSSKRLAGIE----- 241
             .||.|   .:||. :.:|.||:.|:..:...  |..||.:     :.:|..||...||.     
plant   106 VQKKNLVVKQQTKPVEVIETKKEVTKKEVAMSPKNKKVTYS-----SVLSARSKAACGIVNKPKI 165

  Fly   242 -DIDANDKENLVLVSEYVNDIYDYLYQVELE-QPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQF 304
             |||.:||:|.:...|||:|:|.:..:||.| ||  |.::..|.|::.||||:||||:.|||::|
plant   166 IDIDESDKDNHLAAVEYVDDMYSFYKEVEKESQP--KMYMHIQTEMNEKMRAILIDWLLEVHIKF 228

  Fly   305 HLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTAR 369
            .|..||..|.|.||||:|.|....||. |||||::||.||:||||::||.:.|.|::||:.|::|
plant   229 ELNLETLYLTVNIIDRFLSVKAVPKRE-LQLVGISALLIASKYEEIWPPQVNDLVYVTDNAYSSR 292

  Fly   370 QIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDYEMATYRPSEIA 434
            ||..||..|...::..|:.|....||.|:.||:.::.|...|..:..||..:.|:..|:.||.:|
plant   293 QILVMEKAILGNLEWYLTVPTQYVFLVRFIKASMSDPEMENMVHFLAELGMMHYDTLTFCPSMLA 357

  Fly   435 AASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAPQAKLKAIYN 499
            |::::.:...||         ....||.||.|::.|:.:.:...::|:|.|.....:::|:|:|.
plant   358 ASAVYTARCSLN---------KSPAWTDTLQFHTGYTESEIMDCSKLLAFLHSRCGESRLRAVYK 413

  Fly   500 KYQGSKFQKIAL 511
            ||..::...:|:
plant   414 KYSKAENGGVAM 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 61/127 (48%)
Cyclin_C 389..515 CDD:281044 33/123 (27%)
CYC1BATNP_196233.1 CYCLIN_AtCycB-like_rpt1 162..307 CDD:410270 70/147 (48%)
CYCLIN_AtCycB-like_rpt2 312..428 CDD:410215 33/123 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68982
Inparanoid 1 1.050 193 1.000 Inparanoid score I1359
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3050
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.730

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