DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYCB2;1

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_179353.1 Gene:CYCB2;1 / 816269 AraportID:AT2G17620 Length:429 Species:Arabidopsis thaliana


Alignment Length:450 Identity:136/450 - (30%)
Similarity:196/450 - (43%) Gaps:91/450 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NSVRNRV---PTKTT----------------------------------VEPTKVTVKSSSSENV 141
            ||..|::   ||.||                                  |.|..|..:.|...|.
plant     3 NSCENKIFVKPTSTTILQDETRSRKFGQEMKREKRRVLRVINQNLAGARVYPCVVNKRGSLLSNK 67

  Fly   142 NEPTLKREDSNLSKKSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKD 206
            .|     |:....||....||.::.:     ||:          |.||.|:|    |.|:....|
plant    68 QE-----EEEGCQKKKFDSLRPSVTR-----SGV----------EEETNKKL----KPSVPSAND 108

  Fly   207 ATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAG----------------IEDIDANDKENLVLVS 255
            ......|....|    |..:|..|||....:..                |.|||..|.:|.:...
plant   109 FGDCIFIDEEEA----TLDLPMPMSLEKPYIEADPMEEVEMEDVTVEEPIVDIDVLDSKNSLAAV 169

  Fly   256 EYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDR 320
            |||.|:|.:...:|....:..|::..|.:::.||||:||||:.|||.:|.|..||..|.|.:|||
plant   170 EYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEKMRAILIDWLIEVHDKFDLINETLFLTVNLIDR 234

  Fly   321 YLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCN 385
            :|. .::..|..|||||:.||.:|.||||:..|.:.|.|.|:|..||...:.:||..:...:..|
plant   235 FLS-KQNVMRKKLQLVGLVALLLACKYEEVSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFN 298

  Fly   386 LSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHR 450
            :|.|....||:|:.|||.|:.:...::.:.||||.|:|||..:.||.:||.|::.:...|:|:  
plant   299 ISLPTQYPFLKRFLKAAQADKKCEVLASFLIELALVEYEMLRFPPSLLAATSVYTAQCTLDGS-- 361

  Fly   451 AGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKIA 510
                   |.|..|..|:..||...|...:|.:..|.:.|....|..:|.||..|||..||
plant   362 -------RKWNSTCEFHCHYSEDQLMECSRKLVSLHQRAATGNLTGVYRKYSTSKFGYIA 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 49/126 (39%)
Cyclin_C 389..515 CDD:281044 41/121 (34%)
CYCB2;1NP_179353.1 Cyclin_N 174..300 CDD:278560 49/126 (39%)
Cyclin_C 302..419 CDD:281044 41/121 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I1359
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3050
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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