DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccnb1

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_571588.1 Gene:ccnb1 / 58025 ZFINID:ZDB-GENE-000406-10 Length:398 Species:Danio rerio


Alignment Length:428 Identity:161/428 - (37%)
Similarity:236/428 - (55%) Gaps:55/428 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LRSNSVRNRVPTKTTV-EPTKVTVKSSSSENVNEPTLKREDSNLSKKSLTKLRAALAKPVMGVSG 174
            |.|:..:|.:|.|..| ....:..:::..|..|.|..::.   |.||   :::.|.|..|:    
Zfish    12 LASSENQNALPGKAVVANKPGLRPRAALGEIGNNPQTRQA---LKKK---EVKVAPAAEVV---- 66

  Fly   175 IRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMS-------- 231
            :.:.||            :.:.||||.:|:         .|...|:..:|.:|...|        
Zfish    67 VEKAPV------------VQQPKKDSPKVQ---------HGVKVVSEPSSPVPMETSGCASDDLC 110

  Fly   232 -LSSKRLAGIEDIDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLID 295
             ..|..|..|:|:||:|.:|.:|.||||.|||.||.|:|.||.:...:||| |||:..|||:|||
Zfish   111 QAFSDVLLNIKDVDADDYDNPMLCSEYVKDIYLYLRQLETEQAVRPKYLAG-KEVTGNMRAILID 174

  Fly   296 WINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVF 360
            |:.:|.::|.|..||..:.||||||:||.....|: .||||||||:|||:||||::||.|.||.|
Zfish   175 WLVQVQIKFRLLQETMYMTVAIIDRFLQDHPVPKK-QLQLVGVTAMFIASKYEEMYPPEIADFAF 238

  Fly   361 ITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDYEM 425
            :||..||..|||:||:::.:.::....||||:.||||.||......||||::|||:||..|||:|
Zfish   239 VTDRAYTTSQIREMEMKVLRVLNFGFGRPLPLQFLRRASKIGDVTAEHHTLAKYFLELTMVDYDM 303

  Fly   426 ATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAK--LARD 488
            ..|.||::|:|:..|:|.:          ||...|||||..|..|:...|.|:.:.|||  :..:
Zfish   304 VHYPPSQMASAAYALTLKV----------FNCGDWTPTLQHYMGYTEDELVPVMQHIAKNVVRVN 358

  Fly   489 APQAKLKAIYNKYQGSKFQKIALRTELTGALMDSIVGQ 526
            ...:|..|:.|||...|..:||..::|..:|:..:..|
Zfish   359 EGLSKHLAVKNKYSSQKQMRIATISQLKSSLIKDLAKQ 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 70/129 (54%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 49/121 (40%)
ccnb1NP_571588.1 CYCLIN_CCNB1_rpt1 134..262 CDD:410268 70/129 (54%)
CYCLIN_CCNB1_rpt2 267..387 CDD:410272 52/129 (40%)

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