DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccnp

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001038424.1 Gene:ccnp / 561391 ZFINID:ZDB-GENE-030131-5453 Length:398 Species:Danio rerio


Alignment Length:355 Identity:83/355 - (23%)
Similarity:167/355 - (47%) Gaps:23/355 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 KPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMS 231
            ||......::|.|  :|.::.......|:.:..|.:|.::          .|:....:.:|..:|
Zfish    53 KPAQESRWVQRLP--ISAEDGIIMDYAPQGEPTSSDVYEE----------EALLKYLNRLPGPLS 105

  Fly   232 LSSKRLAGI--EDID-ANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVL 293
            . .:.:.|:  .::: |..|..|:....|..||:..:.:.:|...:....|  .|..:...||:|
Zfish   106 F-QELMPGLLRREVEVAISKLGLLFDKTYAWDIFSDMMRSQLLCTLPNADL--PKPFTDTTRAIL 167

  Fly   294 IDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDF 358
            :||:.:||..|..:.||..|.|.:::|.|:::| ...:.|||:||..||:|.|.||...|.:.:.
Zfish   168 VDWLIQVHEVFQFSEETLYLTVHLLNRALRLIK-VSISGLQLLGVVCLFLAAKREECLLPEVSEL 231

  Fly   359 VFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDY 423
            .::.::.|:.:|:.:||.::...:..:|....|:|||...:..|...|:...|::|.:||:.::.
Zfish   232 CYLMENAYSKKQLLRMERRVLIGLKFDLYHCPPLHFLLISASIARCSDKVVWMARYLLELSLLEG 296

  Fly   424 EMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARD 488
            ....|.|:::|.|:|.|:..:|   ..|.....:..|....:.:.. |.|.|..|.:::|..|..
Zfish   297 RCVVYLPAQLAGAALRLARKIL---QEAAAPEAEMAWCIASSIHIG-SEAVLLSIMQIMAIAAAR 357

  Fly   489 APQAKLKAIYNKYQGSKFQKIALRTELTGA 518
            |...:.:|.:.|:...:...:::...|..|
Zfish   358 AQTRETRATFIKFSTVQTLHVSMHPALKAA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 37/129 (29%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 28/119 (24%)
ccnpNP_001038424.1 CYCLIN_CNTD2 164..259 CDD:410245 31/95 (33%)
Cyclin_C 264..384 CDD:397230 28/123 (23%)

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