DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccne2

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001016267.1 Gene:ccne2 / 549021 XenbaseID:XB-GENE-923043 Length:397 Species:Xenopus tropicalis


Alignment Length:240 Identity:48/240 - (20%)
Similarity:78/240 - (32%) Gaps:101/240 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YLP----GSAPCRAVQMTA-----------AAVGVELNLKLTDLMKGEH--MKPEFLKINPQHCI 52
            |||    ..:||..:..||           |:..:.|....| |...||  :..|..::|||   
 Frog   260 YLPYDSKKPSPCEFINTTARVPCFLAGDSRASEHILLATSHT-LFLREHNRLARELKRLNPQ--- 320

  Fly    53 PTLVDNGFALWESRAICTYLAEKYGKDDKLYPKDPQK-----RAVVNQRMYFD--MG-------T 103
                      |:.              :||| ::.:|     ..::..|.|..  :|       .
 Frog   321 ----------WDG--------------EKLY-QEARKILGAFVQIITFRDYLPILLGDHMQKWIP 360

  Fly   104 LYQRFADYYYPQI-----FA------------------KQPANPENE-----------QKMKDAV 134
            .||.:::...|:|     ||                  .||..||.|           :.:||  
 Frog   361 PYQGYSESVDPRISNVFTFAFRFGHLEVPSSMFRLDENYQPWGPEPELPLHTLFFNTWRMVKD-- 423

  Fly   135 GFLNSFLDG-----HKYVAGDSLTIADLSILATISTYDVAGFDLA 174
            |.::..:.|     .|.:..:.:...:|.......|:.:.|||||
 Frog   424 GGIDPLVRGLLAKKSKLMKQNKMMTGELRNKLFQPTHRIHGFDLA 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213
ccne2NP_001016267.1 CYCLIN_CCNE2_rpt1 99..235 CDD:410283
CYCLIN_CCNE2_rpt2 239..337 CDD:410285 22/105 (21%)
Blue background indicates that the domain is not in the aligned region.

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