DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CycJ

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_001237463.4 Gene:CycJ / 4577046 VectorBaseID:AGAMI1_005816 Length:356 Species:Anopheles gambiae


Alignment Length:272 Identity:54/272 - (19%)
Similarity:107/272 - (39%) Gaps:53/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 NLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLA 314
            |....:||..||.:.|.:.| .:.::...::.|.|  |:..:|.:  |..|..|......|..||
Mosquito     9 NAPYCTEYDEDILETLKECE-SRRMNVHFISPQLE--HRRSSVQL--ILNVCKQQSYRRATVHLA 68

  Fly   315 VAIIDRYLQVVKDTKRTY----LQLVGVTALFIATKYEE-----LFPPAIGDFVFITDDTYTARQ 370
            :.::|.::     :..|.    |:||.:|.|::|.|.||     ..|..:..|:   .:.|....
Mosquito    69 IYLLDVFM-----SNHTIAVGRLKLVALTCLYLACKIEENDSSVPSPTRLNGFL---ANVYRPAD 125

  Fly   371 IRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMS-------------KYFIELASVD 422
            ...:|:.|....|.:::.|....||..::..:..:.:...:|             ::..|.:|..
Mosquito   126 FIALEVAILCFFDWHITIPTASTFLDIFAMHSFVQQDWDAVSPPRNGCDSMALLMQHINETSSTI 190

  Fly   423 YE-------MATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITR 480
            .|       ::..:||.:||..:..:..|   ..|...      |:..||..:.|..:.:..:.:
Mosquito   191 LEATLQHLKLSIVKPSLLAAGCIAAARCL---TPRVSV------WSDRLTSATGYEYSQIHEVCQ 246

  Fly   481 LIAKLARDAPQA 492
            ::  |....||:
Mosquito   247 ML--LFEAMPQS 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 32/138 (23%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 20/124 (16%)
CycJXP_001237463.4 None

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