DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccnd3

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001006017.1 Gene:ccnd3 / 449996 ZFINID:ZDB-GENE-041010-110 Length:277 Species:Danio rerio


Alignment Length:188 Identity:54/188 - (28%)
Similarity:93/188 - (49%) Gaps:12/188 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 VELEQP-IHKDHLAG-QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKR 330
            :.||:| |...|:|| :.|...:||.:|..|:.:|..:.....|.|.|||..:|||:. ....:.
Zfish    41 LSLEKPNISGKHIAGAESEELLRMRKILTGWMLQVCEEQKCEEEVFPLAVHYLDRYMS-QSAVRP 104

  Fly   331 TYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFL 395
            .:|||:|...:|:|:|..|..|.:.......||...:..:|.|.|:.:...:..:|:..||..||
Zfish   105 CHLQLLGSVCMFLASKLRETVPLSAETLSIYTDHACSVPEILQWEVLLVSHLQWDLA
SVLPSDFL 169

  Fly   396 RRYSKA--AGAEDEHHTMSKY---FIELASVDYEMATYRPSEIAAA---SLFLSLHLL 445
            .....|  ..|:| |.::.::   :|.|.:.:.:.:.:|||.:|.:   :..|.|.||
Zfish   170 ELILLALPIPAQD-HSSVRRHTHCYIALTATELKFSFFRPSVVACSCVTAALLRLKLL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 35/120 (29%)
Cyclin_C 389..515 CDD:281044 18/65 (28%)
ccnd3NP_001006017.1 Cyclin_N 36..161 CDD:278560 35/120 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579841
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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