DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and LOC394448

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001182327.1 Gene:LOC394448 / 394448 -ID:- Length:390 Species:Xenopus tropicalis


Alignment Length:384 Identity:150/384 - (39%)
Similarity:222/384 - (57%) Gaps:46/384 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 AALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKD--SLEVKKDATRMPLIRGNSAV------ 219
            ||.||    |.| .|.|:    :|...:..:|..|..  :.:|...|.|....|.|.|:      
 Frog    22 AAKAK----VHG-HRAPL----EEISNRTVIPGRKPAIMNCKVAVKAVRQVTSRANVALRIKPTC 77

  Fly   220 -TTTTSTMPTTMSLS----------SKRLAGIEDIDANDKENLVLVSEYVNDIYDYLYQVELEQP 273
             ..:....|.:|.:|          ||.|..::||||.|..|..|.::||.|||.||.|:|::|.
 Frog    78 GPRSEEPPPISMDISVKEEVLCQAFSKALNSVDDIDAEDSFNPQLCTDYVKDIYTYLRQLEVQQA 142

  Fly   274 IHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGV 338
            :...:|.|. ||:.:|||:|:||:.:|||:|.|..||..:|:||:||:|| .:...|:.||||||
 Frog   143 VRPRYLHGM-EVNERMRAILVDWLIQVHLKFQLLQETLYMAIAIMDRFLQ-GQPISRSKLQLVGV 205

  Fly   339 TALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAG 403
            |:||||:||||::.|.|.|||:|||:||:..|||:||:.|.|.::.:|.||||::||||.||...
 Frog   206 TSLFIASKYEEMYYPEISDFVYITDNTYSKAQIREMEMMILKELNFDLGRPLPLNFLRRASKCCS 270

  Fly   404 AEDEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYS 468
            |:...||::|||:||..:||:|..:.||.||||:|.|:..:||    .||      |..||.||:
 Frog   271 ADAGQHTLAKYFMELTLLDYDMVHFHPSAIAAAALCLTQKVLN----IGT------WDATLQFYT 325

  Fly   469 RYSAAHL----RPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKIALRTELTGALMDSI 523
            .||...|    :.:.::|.::.::  |.|..::.|||..||..||:...:|...::..:
 Frog   326 GYSQDDLILPMKHMAKVIVQVNQN--QTKFLSVKNKYSSSKLLKISTIPQLNSRVLTGL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 65/126 (52%)
Cyclin_C 389..515 CDD:281044 50/129 (39%)
LOC394448NP_001182327.1 COG5024 <92..371 CDD:227357 130/292 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I5007
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 241 1.000 Inparanoid score I3249
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm48327
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.970

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