DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycB and CycA

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster


Alignment Length:505 Identity:132/505 - (26%)
Similarity:219/505 - (43%) Gaps:97/505 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KDAAQKDSKDLKLTDALRNAKARVDSHWKKQPLGSTNG----------------NGNGAVPPKVN 103
            :|.:.|::..:|:...::|.         ||||....|                |||..||....
  Fly     8 QDMSNKENPGIKIPAGVKNT---------KQPLAVIGGKAEKNALAPRANFAVLNGNNNVPRPAG 63

  Fly   104 EGGVSAFLRSNSVRNRV---PTKTTVEPTKVTVKSSSSENVNEPTLKREDSNLSKKSLTKLRAAL 165
            :..|...:|:.:|...|   ..|:.|.|.....|:.|....|..|....    |.|||..|    
  Fly    64 KVQVFRDVRNLNVDENVEYGAKKSNVVPVVEQFKTFSVYEDNNDTQVAP----SGKSLASL---- 120

  Fly   166 AKPVMGVSGIRREPVAVSRKEAETK-----KELPETKKDSLEVKKDATRMPLIRGNS-------- 217
                            |.::..:.|     |||.:...||..:.....:.|:....|        
  Fly   121 ----------------VDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGVIQSS 169

  Fly   218 --AVTTTTSTMPTTMSLSSKRLAGIEDI-DANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHL 279
              :|.|.|...||         ..:::: ..||::..:.|.:|..||.:|..:.|.:......::
  Fly   170 DISVGTETGVSPT---------GRVKELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYM 225

  Fly   280 AGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIA 344
            ..||::||.||::||||:.||..::.|..||..|:|..:||:|..:. ..|:.|||||..|::||
  Fly   226 RRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA-VVRSKLQLVGTAAMYIA 289

  Fly   345 TKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHH 409
            .||||::||.:|:|||:|||:||..|:.:||..|.|.:..:|..|....|:..|:......::..
  Fly   290 AKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTYAVLCDMPEKLK 354

  Fly   410 TMSKYFIELASVDYE-MATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAA 473
            .|:.|..||:.::.| ...|.||.:::||:.|:.|:|          ....|||.|...:.|...
  Fly   355 YMTLYISELSLMEGETYLQYLPSLMSSASVALARHIL----------GMEMWTPRLEEITTYKLE 409

  Fly   474 HLRPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKIALRTELTGALMDSI 523
            .|:.:...:....:.|.:...:|:..||....::|:        |:|:|:
  Fly   410 DLKTVVLHLCHTHKTAKELNTQAMREKYNRDTYKKV--------AMMESV 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 53/126 (42%)
Cyclin_C 389..515 CDD:281044 27/126 (21%)
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 53/126 (42%)
Cyclin_C 334..450 CDD:281044 29/133 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447484
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34088at33392
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - P PTHR10177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
87.750

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