DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CycE

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster


Alignment Length:499 Identity:115/499 - (23%)
Similarity:191/499 - (38%) Gaps:146/499 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 AAQKDSKDLKLTDALRNAKARVD---SHWKKQPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRN 118
            |:|:..::|..|    :|.:|.|   |...:....||....||                 |..:.
  Fly    71 ASQRSEEELPGT----SAASRTDEMCSCDSQNLAASTAATSNG-----------------NKRKR 114

  Fly   119 RVPTKTTVEPTKVTVKSSSSENVNEPTL-KREDSNLSKKSLTKLRAALAKPVMGVSG-IRREPVA 181
            |:.:.:..:|.......|:......|.| ..|..|||..:    .:....||:.|.| ..:|.::
  Fly   115 RLSSDSNEDPELGFEPPSAKRQQRLPALYGSEQGNLSSVA----SSVYTSPVVSVDGQSTQELLS 175

  Fly   182 VSRKEAETKKE-----LPETKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRL-AGI 240
            :....||...|     ||::........:.:.:.|::...:|....|||:.|..:.....| ...
  Fly   176 IRSSPAEDLSEAPHSPLPDSPDSPPSPDRGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDSC 240

  Fly   241 ED--IDANDKENLVLVSEYVNDIYDY--------------------------LYQVELEQPI--- 274
            ||  .|.:|:::   |.|..:|:..|                          .:|.::..|:   
  Fly   241 EDYSYDEDDEDD---VEEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDL 302

  Fly   275 -------------------------------------HKDH----------LAGQKEVSHKMRAV 292
                                                 |:|.          |.....:..:|||:
  Fly   303 MINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAI 367

  Fly   293 LIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGD 357
            |:||:.||...:.|..|||.|||..:||||.|....::|:|||:|:|.||:|.|.||::||.||:
  Fly   368 LLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGE 432

  Fly   358 FVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPI-HFLRRY------------------SKAAG 403
            |.::||...|.|.|...|..:.:|:|.::| |:.| .:|..|                  .|:|.
  Fly   433 FAYVTDGACTERDILNHEKILLQALDWDIS-PITITGWLGVYMQLNVNNRTPASFSQIGRQKSAE 496

  Fly   404 AEDE---------HHTMSKYFIELASVDYEMATYRPSEIAAASL 438
            |:|.         ....:...::|.::|..||.|..|.:|||::
  Fly   497 ADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAI 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 52/202 (26%)
Cyclin_C 389..515 CDD:281044 17/78 (22%)
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 48/128 (38%)
Cyclin_C <517..>571 CDD:281044 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447490
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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