DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccng2

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_998337.1 Gene:ccng2 / 266794 ZFINID:ZDB-GENE-021016-1 Length:330 Species:Danio rerio


Alignment Length:227 Identity:50/227 - (22%)
Similarity:90/227 - (39%) Gaps:46/227 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 VSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEE 349
            ||.|.|...::.:..:...|..:.:||.|||.::||:|.::| .:..||..:.:..|.||.:..|
Zfish    40 VSAKCRDARVEDLWSLTNFFGYSTQTFVLAVNLLDRFLAMMK-VQPKYLACISIGCLHIAVRVTE 103

  Fly   350 LFPPAIG--------DFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAED 406
                  |        :.:.|:...:|...:.:||..|.:.::........:.||..|...|.:  
Zfish   104 ------GECNVSSSHELIRISQCKFTVSDLSRMEKIISEKLNFQFKAVTALTFLHLYHAIALS-- 160

  Fly   407 EHHTMSKYFIELASVDYEM---------ATYRPSEIAAASLFL------SLHLLNGNHRAGTGFN 456
             |.:..|..:.|..::.::         :..:||.:|.:.|.|      |..||...||..|   
Zfish   161 -HTSNRKDVLNLDKLEAQLKACLCRIVFSKAKPSVLALSLLMLEIEALQSADLLEIAHRIQT--- 221

  Fly   457 DRHWTPTLTFYSRYSAAHLRPITRLIAKLARD 488
                      :.:.|.|.|.....|:.:..||
Zfish   222 ----------HLKISKADLGRWRGLVGQCIRD 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 26/109 (24%)
Cyclin_C 389..515 CDD:281044 24/115 (21%)
ccng2NP_998337.1 CYCLIN <59..140 CDD:294043 22/87 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579826
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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