DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycB and cig1

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_588110.2 Gene:cig1 / 2539433 PomBaseID:SPCC4E9.02 Length:415 Species:Schizosaccharomyces pombe


Alignment Length:410 Identity:116/410 - (28%)
Similarity:194/410 - (47%) Gaps:61/410 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 NEPTLKREDSNLSKKSLTKLRAALAKPVMGVSGIRR--EPV--------AVSRKEAET------- 189
            :|..|:::...:.|||..||...:..|...|..|.:  ||.        ::|....:|       
pombe    15 DENQLQKDHIYVKKKSHIKLNTGVRAPFKAVDNINQQDEPTLIEGNNESSISSSTGDTFEEDFAY 79

  Fly   190 --KKELPE-----TKK----DSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGI--- 240
              |.|:.|     |.|    |.||.::.:...|    ...:|.....:||....:.:.||.:   
pombe    80 QDKVEIEERSIRSTPKSIGDDDLENREGSFDAP----EGILTHGKHRLPTIPEWTKEDLAALSEA 140

  Fly   241 ----------EDIDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLID 295
                      |||:.:..    :|.:|..:|:.|:..:|.:.....::::.|:|:....|.:|:|
pombe   141 AARLQANPSPEDIETDPS----MVPDYDPEIFHYMQSLERKLAPPPNYMSVQQEIDWVTRHMLVD 201

  Fly   296 WINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVF 360
            ||.:|.:.|.|..||..|||.:|||:|. :|......:||||::||.||.||||:.||:|.:|..
pombe   202 WIVQVQIHFRLLPETLFLAVNLIDRFLS-IKVVSLQKVQLVGLSALLIACKYEEIHPPSIYNFAH 265

  Fly   361 ITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDYEM 425
            :....:|..:|.:.|..:...:|.::|.|.|:.||||.|:|...:.:...::||..|:..:|...
pombe   266 VVQGIFTVDEIIRAERYMLMLLDFDISWPGPMSFLRRISRADSYDHDIRMLAKYLQEVTLMDEIF 330

  Fly   426 ATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAP 490
            .....|.|||.:.:||:.:|        |..|  |||...:||.|:|..|:|...:|.:...|||
pombe   331 IGAHISFIAATAYYLSMQML--------GHLD--WTPCHVYYSGYTARQLKPCAIIIMECLVDAP 385

  Fly   491 QAKLKAIYNKYQGSKFQKIA 510
            ... .|||.||..::.::::
pombe   386 NHH-NAIYRKYSENRMKRVS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 43/126 (34%)
Cyclin_C 389..515 CDD:281044 39/122 (32%)
cig1NP_588110.2 COG5024 1..414 CDD:227357 116/410 (28%)
Cyclin_N 166..292 CDD:278560 43/126 (34%)
Cyclin_C 294..408 CDD:281044 39/122 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 59 1.000 Domainoid score I3040
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I1152
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm47210
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
TreeFam 00.000 Not matched by this tool.
109.790

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