DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and cyb-3

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_506825.4 Gene:cyb-3 / 180040 WormBaseID:WBGene00000868 Length:385 Species:Caenorhabditis elegans


Alignment Length:375 Identity:99/375 - (26%)
Similarity:170/375 - (45%) Gaps:52/375 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 ENVNEPTLKREDSNLSKKSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEV 203
            :|.:||..|::.|    |.||:|||.::.  ..:...:|:|:..||......:.||..|...:: 
 Worm    34 KNPSEPAAKKQHS----KGLTELRAHISG--FKIDSAKRDPLGKSRTSRRDVENLPPQKSRYVD- 91

  Fly   204 KKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIEDIDANDKENLVLVSEYVNDIYDYLYQV 268
                                   |...          .|.|..:..|...:|:|...|:||....
 Worm    92 -----------------------PCPH----------YDYDLEEAGNPDSISDYAQGIFDYYRHR 123

  Fly   269 ELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYL 333
            |:...:.| :|....||..|.||:||||:.|:...|.|..||...||.:.|.||...|:..:..:
 Worm   124 EVHFRVRK-YLHKHPEVDVKTRAILIDWMVEIQETFELNHETLYNAVKLTDMYLCKTKNVDKNTI 187

  Fly   334 QLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRY 398
            |.:...|:|||.||:|..||.:.|.::::.|.::..::..||.::|..:..:|..||...:|||:
 Worm   188 QKLACVAIFIAAKYDERSPPLVDDLIYLSGDRFSRDELLAMERELFATVGYDLGSPLSYRYLRRF 252

  Fly   399 SKAAGAEDEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPT 463
            .:....:.:..||.::.:|.:.:.||.|....|.:|||:..|::.:|:.|       |:..|.|.
 Worm   253 GRVCRVDMKTLTMGRFILETSLMVYEYAMVSQSRLAAAAFVLAMRMLDKN-------NEYEWNPV 310

  Fly   464 LTFYSRYSAAHLRPIT---RLIAKLARDAPQAKLKAIYNKYQGSKFQKIA 510
            |..||.::...:.|:.   ..|...::| ..|:|.::..||....|..:|
 Worm   311 LEKYSGFTGEEVMPLVEHMNHILHFSKD-KWAQLTSVRQKYSHEVFFHVA 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 41/126 (33%)
Cyclin_C 389..515 CDD:281044 33/125 (26%)
cyb-3NP_506825.4 Cyclin_N 116..241 CDD:278560 41/125 (33%)
Cyclin_C 243..364 CDD:281044 33/125 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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