DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and cyb-2.1

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_502047.1 Gene:cyb-2.1 / 177994 WormBaseID:WBGene00000866 Length:317 Species:Caenorhabditis elegans


Alignment Length:317 Identity:102/317 - (32%)
Similarity:167/317 - (52%) Gaps:37/317 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 TTSTMPTTMSLSSKRLAGIEDIDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVS 286
            |||...||.:....| ..:|::     .|.:.::|   |||:||...|.:..:....:.| ..|:
 Worm     5 TTSIRKTTKNAVGPR-TNLEEV-----LNCIAMAE---DIYNYLVHHEKKYVLDDSFING-GNVN 59

  Fly   287 HKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKD-TKRTYLQLVGVTALFIATKYEEL 350
            .|||.:|:||:.:|||:|||..||..|.:.::||.  :||: ..:...||:||.|||:|:|:|::
 Worm    60 SKMRRILVDWLIQVHLRFHLTPETLHLTIFVLDRI--IVKNIVSKAEFQLLGVAALFVASKFEDI 122

  Fly   351 FPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEH------- 408
            :.|.|.::..|||:|::.:||..||..|..|::.:||.|..:.|||..||.....|.:       
 Worm   123 YLPDILEYEMITDNTFSKKQIMAMEQTILNALNFDLSCPSSLVFLRCISKTLTENDVNPIDKEAF 187

  Fly   409 ---HTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRY 470
               |.:||...|||.:|..|:|...|.:|:||:.::|:::..:     |.|.:   ...:...:.
 Worm   188 YYVHNISKCLGELALLDSVMSTVPRSHVASASMIITLNVITVD-----GINPK---TAASMIRKQ 244

  Fly   471 SAAHLRPITRLIAKLARDA----PQAKLKAIYNKYQGSKFQKIALRTELTGALMDSI 523
            ..|..:.|...||.||:.|    ...||.||..|||.|||.:::..  :|..:::.|
 Worm   245 LGASKQDIYDAIALLAQVAYKNFRHQKLCAIREKYQSSKFGRVSYL--MTDEILEKI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 49/127 (39%)
Cyclin_C 389..515 CDD:281044 40/139 (29%)
cyb-2.1NP_502047.1 COG5024 <32..300 CDD:227357 94/284 (33%)
Cyclin_N 34..159 CDD:365896 49/127 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162423
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I3079
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm14125
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

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