DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and cyb-1

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_501987.1 Gene:cyb-1 / 177965 WormBaseID:WBGene00000865 Length:361 Species:Caenorhabditis elegans


Alignment Length:357 Identity:113/357 - (31%)
Similarity:182/357 - (50%) Gaps:41/357 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 KKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIED------IDANDKENLVLVS 255
            :||||::.|.... ||...|:....|.......::|.....|.:|.      |:..|.|...|. 
 Worm    15 EKDSLQMAKHGNG-PLKPVNAQGLQTKREAREILALKPSNPAPVETAQKSQRINLQDAETKCLA- 77

  Fly   256 EYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDR 320
             ..:|||.||...|.:..:.:..:.| .|.:.|||.:|:||:.:||::|||..||..|.|.|:||
 Worm    78 -MADDIYKYLVHHEKKYLLEECFMEG-GEPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDR 140

  Fly   321 YLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCN 385
            .|| .|.|.:..|||:|::|:|:|:|:||::.|.|.|:.|||::||:.:||..||..|..:::.:
 Worm   141 MLQ-KKVTSKADLQLLGISAMFVASKFEEVYLPDIHDYEFITENTYSKKQILAMEQTILNSLNFD 204

  Fly   386 LSRPLPIHFLRRYSKAAGAEDEH----------HTMSKYFIELASVDYEMATYRPSEIAAASLFL 440
            ||.|..:.|||..|:.....|..          :.:||...|||.:|..||:...|.||:||:.:
 Worm   205 LSCPSSLVFLRCLSRILSENDASPIDNQAFCYTYNISKCLGELALLDSVMASTPRSHIASASMII 269

  Fly   441 SL--HLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLA----RDAPQAKLKAIYN 499
            :|  |.::|.....          .::...:...|..:.|...:|.||    ::..|.||.||.|
 Worm   270 ALEVHPVDGIEAEN----------AVSVICKQLGASKKVIEDAVALLAEVSYKNFKQGKLVAIKN 324

  Fly   500 KYQGSKFQKIALRTELTGALMDSI--VGQSQR 529
            |||.||..:::  ..:|..:::.|  :||:.:
 Worm   325 KYQSSKLAQVS--NLMTDDVLEKINRMGQNAK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 53/126 (42%)
Cyclin_C 389..515 CDD:281044 38/141 (27%)
cyb-1NP_501987.1 Cyclin_N 81..206 CDD:278560 53/126 (42%)
Cyclin_C 208..337 CDD:281044 38/140 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162422
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I3079
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm14125
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - LDO PTHR10177
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.830

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