DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CycB3

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_312460.6 Gene:CycB3 / 1273481 VectorBaseID:AGAMI1_009615 Length:734 Species:Anopheles gambiae


Alignment Length:705 Identity:171/705 - (24%)
Similarity:251/705 - (35%) Gaps:220/705 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVGTTLKMRGDENASENFKQVQLKKLTVPSMEATTKRAALGDLQN-------------------R 46
            ||.|..|.:.|              :::...|...||.|||:|.|                   .
Mosquito    39 MVETGTKRKAD--------------MSLAKQEIGAKRFALGNLTNAETTGTASTIGSVLKSKMTN 89

  Fly    47 GISRPIAAK-----DAAQ----------KDSKDLK-------LTDALRNAKARVDSHWKKQ---P 86
            .:|:|:.:.     |.|:          |.:|..|       :|.|....:..||.:.|.|   |
Mosquito    90 FLSKPMMSSNKLIGDVAKPTWKPNEQHFKKNKPPKIHGVPRIMTRAAMRKQQAVDVNQKTQQDRP 154

  Fly    87 LGSTNGNGNGAVPPKV-----NEGGVSAFLRSNS--------------VRNRVPTKTTVEPTKVT 132
            :....|..|  ||...     |..||||..:|..              |.||...|..:.....|
Mosquito   155 ISVMKGKEN--VPSSSDTVSGNVAGVSALAQSRKAEELVAKPKPLATVVTNRASWKNVLRARSTT 217

  Fly   133 VKSSSSENVNEPTLKREDSNLSKKSLTKLRAALA-------KPVMG--------------VSGI- 175
            |.:.:....|:.....|    .|||.....|.||       ||..|              |:.: 
Mosquito   218 VATGAEIATNDSASNGE----QKKSQQAANACLAKHAEVVVKPKRGRMSSEFEASDNSLYVTAVD 278

  Fly   176 ----------------------------------RREPVAVSRK------------------EAE 188
                                              |.||...:.|                  |.|
Mosquito   279 NFEDGSAASAGTGPDCVDPLGPDCVDPLGPEIAPRNEPAPPAAKPLAARADVKPKQRGRGSSEFE 343

  Fly   189 TKKELPETKKDSLE----------------------------VKKDATRMP--------LIRGNS 217
            ....|..|..|:|:                            .||...|:.        ||..|.
Mosquito   344 DSGTLYMTAVDNLDDGATISNKGKAVAAAGRVATTGASLAAPDKKTKARVEDENGPWKMLITENV 408

  Fly   218 AVTTTTSTMPTTMSLSSKRL---AGIEDIDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHL 279
            |:|..     .|..:...|.   |.:||.|.....::..||||..||:|||.:.|....| .|::
Mosquito   409 ALTRA-----ATAEIGVPRKQPPASVEDYDLCYWNDIYQVSEYAQDIFDYLQEREPAYDI-PDYM 467

  Fly   280 AGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIA 344
            ..||.::.:|||:|:||:.|:...|.|..||..|||.|:|.||..| ......|||||:..:.||
Mosquito   468 VRQKHLTKRMRALLVDWMIEIQETFELNHETLYLAVKILDTYLSRV-TIGHEVLQLVGIAGMLIA 531

  Fly   345 TKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHH 409
            :||:|..||.:.|||:..|..|....:.:||..:|:.|:.:|..||...|||||::.........
Mosquito   532 SKYDERLPPTVDDFVYFCDGAYDRNDLLKMERTVFRTIEFDLGFPLSYRFLRRYARVNRIPMMTL 596

  Fly   410 TMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAH 474
            |:::|.:|...:||.....|.|::|..:||::..:|:   :.|       |..||.:||.|.   
Mosquito   597 TLARYILETGLMDYNTVLVRDSKLACGALFIARRMLD---QPG-------WNETLEYYSSYK--- 648

  Fly   475 LRPITRLIAKL--ARDAPQAKLKAIYNKYQGSKFQKIALRTELTGALMDSIVGQS 527
            :...|..|..|  ...:.|.....::.||....|.::|.|..:|.  |:.:...|
Mosquito   649 VEQFTDAIVLLNNGMSSRQYSFDTVHKKYSHELFFEVAKRPVITS--MEKLFATS 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 54/129 (42%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 32/121 (26%)
CycB3XP_312460.6 None

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