DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and Ccnd2

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_036021678.1 Gene:Ccnd2 / 12444 MGIID:88314 Length:349 Species:Mus musculus


Alignment Length:355 Identity:83/355 - (23%)
Similarity:141/355 - (39%) Gaps:89/355 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 VSRKEAETKKELPETKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIE----- 241
            |.|:||.|....              |.|.|:||:...|::|   |....|....||||.     
Mouse     8 VHREEAMTPSSW--------------TEMSLLRGDGIRTSST---PGWSVLRVTWLAGIRQSGPS 55

  Fly   242 -----------DID-----------ANDK--ENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQ 282
                       ::|           ..|:  :||:.:.|      .||.|....:.:       |
Mouse    56 GGRLAMELLCCEVDPVRRAVPDRNLLEDRVLQNLLTIEE------RYLPQCSYFKCV-------Q 107

  Fly   283 KEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKY 347
            |::...||.::..|:.||..:.....|.|.||:..:||:|..| .|.:|:|||:|...:|:|:|.
Mouse   108 KDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGV-PTPKTHLQLLGAVCMFLASKL 171

  Fly   348 EELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTM- 411
            :|..|.........||::...:::.:.||.:...:..||:...|..|:....:....:.|..:: 
Mouse   172 KETIPLTAEKLCIYTDNSVKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLI 236

  Fly   412 ---SKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAA 473
               ::.||.|.:.|::.|.|.||.||..|:..::          .|........|||        
Mouse   237 RKHAQTFIALCATDFKFAMYPPSMIATGSVGAAI----------CGLQQDDEVNTLT-------- 283

  Fly   474 HLRPITRLIAKLAR------DAPQAKLKAI 497
             ...:|.|:||:..      .|.|.:::|:
Mouse   284 -CDALTELLAKITHTDVDCLKACQEQIEAL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 34/126 (27%)
Cyclin_C 389..515 CDD:281044 25/119 (21%)
Ccnd2XP_036021678.1 CYCLIN_CCND2_rpt1 61..209 CDD:410277 38/161 (24%)
CYCLIN_CCND2_rpt2 214..318 CDD:410280 25/118 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836352
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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