DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycB and Ccna1

DIOPT Version :9

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001292150.1 Gene:Ccna1 / 12427 MGIID:108042 Length:421 Species:Mus musculus


Alignment Length:441 Identity:125/441 - (28%)
Similarity:206/441 - (46%) Gaps:61/441 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 NGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV----------------EPTKVTVKSSSSENVNE 143
            :|...|.|.:|..:..:.|.:...:.|.:.||                |.|.:.. .|.||||..
Mouse     8 SGVALPPVGQGPDACQMLSRAQLGQDPPQRTVLGVLTENEQYRRTCGQEITAIRC-FSGSENVFP 71

  Fly   144 PTLKR--EDSNLSKKSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDSLEVKKD 206
            ...|:  .|..:::.:.......:..|..|      :....|.||....:::.|.  |:..:|.|
Mouse    72 AAGKKVLSDHGVNEPAKRGFDIYMDDPEQG------DRDTCSGKEGIIFEDVYEV--DTSMLKSD 128

  Fly   207 ATRMPLIRGNSAVTTTTSTM---PTTMSLSSKRLAGIEDIDAND-KENLVLVSEYVNDIYDYLYQ 267
            ...  |:..|     |.|.|   |||.:.|.         :|.| ..:::.|:||..:|:.||.:
Mouse   129 LHF--LLDFN-----TVSPMLVDPTTHAQSE---------EATDFGSDVINVTEYAEEIHRYLRE 177

  Fly   268 VELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTY 332
            .|:.......::..|.:::..|||:|:||:.||..::.|..||..|||..:||:|..: ...|..
Mouse   178 AEVRHRPKAHYMRKQPDITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCM-SVLRGK 241

  Fly   333 LQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRR 397
            |||||..|:.:|:||||::||.:.:||:|||||||.||:.:||..:.|.:..:|:.|....||.:
Mouse   242 LQLVGTAAILLASKYEEIYPPDVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVPTTNQFLLQ 306

  Fly   398 YSKAAGAEDEHHTMSKYFIELASVDYE-MATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRH-W 460
            |.:..|.......::||..||:.::.: ...|.||.:|||:..|:.:::|           || |
Mouse   307 YLRRQGVCIRTENLAKYVAELSLLEADPFLKYLPSLVAAAAYCLANYIVN-----------RHFW 360

  Fly   461 TPTLTFYSRYSAAHLRPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKIAL 511
            ..||..::.||...:.|....:.|.....|....:||..||:.||:..::|
Mouse   361 PETLAAFTGYSLNEIVPCLSELHKACLSIPHRPQQAIREKYKASKYLHVSL 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 Cyclin_N 260..387 CDD:278560 50/126 (40%)
Cyclin_C 389..515 CDD:281044 34/125 (27%)
Ccna1NP_001292150.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 4/12 (33%)
Cyclin_N2 27..>101 CDD:406812 13/74 (18%)
CYCLIN_CCNA1_rpt1 132..294 CDD:410263 64/176 (36%)
CYCLIN_CCNA1_rpt2 298..420 CDD:410266 34/125 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836368
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

Return to query results.
Submit another query.