DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccno

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_073805797.1 Gene:ccno / 101883490 -ID:- Length:334 Species:Danio rerio


Alignment Length:275 Identity:66/275 - (24%)
Similarity:116/275 - (42%) Gaps:56/275 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 TTTTSTMPTTMSLSSKRLAGIED---------------IDANDKENLVLVSEYVNDIYDYLYQVE 269
            |..:|..|:: :||.   :|.||               .|..|.|...::.           ::.
Zfish    33 TEMSSPSPSS-TLSD---SGFEDELLCSPVRCASDSQVCDYEDSETCFIIQ-----------RLN 82

  Fly   270 LEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQ 334
            .:|.:..:.|:.|.:::.:.|:.|:.|:..|..|..|:.|:..|||.|:||:| :.........|
Zfish    83 QQQFLALNCLSRQPQITAEARSKLVSWLIAVRRQLSLSFESCCLAVNIMDRFL-ITTSVAADCFQ 146

  Fly   335 LVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFL---- 395
            |:|||:|.||||..|::.|.|...:.:..::::..|:..:|..|...::..|:.|....||    
Zfish   147 LLGVTSLLIATKQVEVYSPRITQLLSLCCNSFSREQLCNLECLILLRLNFRLAAPTLAFFLDYFT 211

  Fly   396 -----------------RRYSKAAGAEDEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLH 443
                             ..:.:.:.||::...::....||:..||....|.||.||..:|.|:..
Zfish   212 SRFTGHQTGEFISAQNAHLHKEPSSAENKWRWLACKVCELSLADYTFNKYMPSVIAQCALKLAKD 276

  Fly   444 LLN----GNHRAGTG 454
            ||.    .|....||
Zfish   277 LLKTQSVQNSEDNTG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 33/129 (26%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 21/91 (23%)
ccnoXP_073805797.1 None

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