DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccnj

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001128285.1 Gene:ccnj / 100038087 XenbaseID:XB-GENE-485597 Length:385 Species:Xenopus tropicalis


Alignment Length:283 Identity:70/283 - (24%)
Similarity:109/283 - (38%) Gaps:55/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 ENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQL 313
            |.|....:...||:..|...||:.|.:|    ||.. ...:|....|.|..|..:|.|......|
 Frog     4 EGLWWKGQLAADIHQTLRYKELKLPSYK----GQSP-QLNLRRYFADLIAIVSNRFKLCPTARHL 63

  Fly   314 AVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDD------------TY 366
            ||.::|.::... |.....|.:|.::.|.:|:|:|:.     .|.|...|.            ..
 Frog    64 AVYLLDLFMDRY-DISIQQLHIVALSCLLLASKFEDK-----EDRVPKLDQLNSLGCMTNMNLVL 122

  Fly   367 TARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHT-------------MSK---YF 415
            |.:.:..|||.:.:..:.||..|.|.||:..|...|..:.:.|.             |:|   ||
 Frog   123 TKQNLLHMELLLLETFEWNLCLPTPAHFIEYYLSIAVHDTDLHDGWPMICLEKTKIYMAKYADYF 187

  Fly   416 IELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRP-IT 479
            :|::..|:....|.||.:|||.:..|..:|.         ....|...|...:.|:...|.| |.
 Frog   188 LEVSLQDHMFLNYVPSLVAAACVAASRIILR---------LSPSWPTRLHRLTVYAWDILVPCIE 243

  Fly   480 RLIAKLARDAPQAKLKAIYNKYQ 502
            ||:.....|..:|      ||::
 Frog   244 RLLIAHDNDVKEA------NKHK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 33/141 (23%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 33/131 (25%)
ccnjNP_001128285.1 CYCLIN_CCNJ-like_rpt1 34..140 CDD:410231 24/112 (21%)
CYCLIN_CCNJ-like_rpt2 145..245 CDD:410232 27/108 (25%)

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