DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccnd2

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_002940348.2 Gene:ccnd2 / 100038071 XenbaseID:XB-GENE-481219 Length:290 Species:Xenopus tropicalis


Alignment Length:244 Identity:63/244 - (25%)
Similarity:104/244 - (42%) Gaps:36/244 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 IDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEVHLQFHLA 307
            :|.....||:.|.|      .||.|....:.:       ||::...||.::..|:.||..:....
 Frog    22 LDDRVLHNLLTVEE------RYLPQCSYFKCV-------QKDIQPFMRRMVATWMLEVCEEQRCE 73

  Fly   308 AETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIR 372
            .|.|.||:..:||:|.|: .|::.:|||:|...:|:|:|.:|..|.........||::...:::.
 Frog    74 EEVFPLAMNYLDRFLAVI-PTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELL 137

  Fly   373 QMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTM----SKYFIELASVDYEMATYRPSEI 433
            :.||.:...:..||:...|..|:....:......|...:    ::.||.|.:.|:..|.|.||.|
 Frog   138 EWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKEKLLLIRKHAQTFIALCATDFNFAMYPPSMI 202

  Fly   434 AAASL---FLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPIT 479
            |..|:   ...|.|.:|.    |.|:....|           .||..||
 Frog   203 ATGSVGAAICGLQLDDGE----TSFSGDSLT-----------EHLAKIT 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 34/129 (26%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 24/98 (24%)
ccnd2XP_002940348.2 CYCLIN_CCND2_rpt1 1..150 CDD:410277 37/141 (26%)
CYCLIN_CCND2_rpt2 155..259 CDD:410280 24/97 (25%)

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