DRSC/TRiP Functional Genomics Resources

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Protein Alignment blw and Vha68-1

DIOPT Version :9

Sequence 1:NP_726243.1 Gene:blw / 37617 FlyBaseID:FBgn0011211 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001260426.1 Gene:Vha68-1 / 45668 FlyBaseID:FBgn0265262 Length:614 Species:Drosophila melanogaster


Alignment Length:606 Identity:127/606 - (20%)
Similarity:219/606 - (36%) Gaps:164/606 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ETGRVLSIGDGIARVYGLNNIQADEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKR 132
            |.|||.::...:.....::.....|:|... ..|.|..:.||.|...:.|:.....:..||.|.|
  Fly    15 EYGRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDPVLR 79

  Fly   133 TGAIVDVPVGDELLGRVVDAL----------------------------------------GNAI 157
            ||..:.|.:|..::|.:.|.:                                        |:.|
  Fly    80 TGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMWEFNPLNVRVGSHI 144

  Fly   158 DG---KGAI--NT--KDRFRVGIKAPGII------------------------------------ 179
            .|   .|.:  ||  |.|..|..:|.|.:                                    
  Fly   145 TGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDGEITKHTMLQVWPVR 209

  Fly   180 -PR-----VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDES 238
             ||     :....|:.||.:.:|||.|..:|....|.|....||      |:|:|.....:..: 
  Fly   210 QPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGK------TVISQALSKYSNSD- 267

  Fly   239 KKLYCIYVAIGQKRSTVAQIVK----------RLTDSGAMGYSVIVSATASDAAPLQYLAPYSGC 293
               ..|||..|::.:.::::::          .:|:| .|..:.:|:.|::.....:..:.|:|.
  Fly   268 ---VIIYVGCGERGNEMSEVLRDFPELTCEIDGVTES-IMKRTALVANTSNMPVAAREASIYTGI 328

  Fly   294 AMGEYFRDKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAKMS 355
            .:.|||||.|.:..::.|..|:.|.|.|::|..|...|....||.   ||.:||   .|||.::.
  Fly   329 TLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPA---YLGARLATFYERAGRVK 390

  Fly   356 PAMGG----GSLTALPVIETQAGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVS 414
             .:|.    ||::.:..:....||.|..:.:..:.|.  |:|  |:.:|..:...|:||..:|.|
  Fly   391 -CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSINWLISYS 452

  Fly   415 RVGSAAQTKAMKQ------VAGSMKLELAQYREVAAFAQF-GSDLDAATQQLLNRGVRL--TELL 470
            :...|......|.      :...:|..|.:..:::...|. |....|.|.::.....:|  .:.|
  Fly   453 KYMRALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFL 517

  Fly   471 KQGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKD------- 528
            :|..|.|.   |:|...|             |.....:..:...:|:..|:..|...|       
  Fly   518 QQNSYSPY---DRVCPFY-------------KTVGMLRNIMAFYETARHAVESTAQSDNKITWNT 566

  Fly   529 ------GAISEASDAKLKDIV 543
                  |.:.:.|..|.||.|
  Fly   567 IRESMGGIMYQLSSMKFKDPV 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blwNP_726243.1 PRK09281 46..552 CDD:236448 127/606 (21%)
ATP-synt_ab_N 68..134 CDD:280947 16/65 (25%)
F1_ATPase_alpha 136..417 CDD:238552 82/388 (21%)
ATP-synt_ab_C 426..520 CDD:278722 17/102 (17%)
Vha68-1NP_001260426.1 V-ATPase_V1_A 15..606 CDD:273411 127/606 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454781
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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