DRSC/TRiP Functional Genomics Resources

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Protein Alignment blw and Vha68-2

DIOPT Version :9

Sequence 1:NP_726243.1 Gene:blw / 37617 FlyBaseID:FBgn0011211 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001246015.1 Gene:Vha68-2 / 45012 FlyBaseID:FBgn0263598 Length:614 Species:Drosophila melanogaster


Alignment Length:617 Identity:124/617 - (20%)
Similarity:226/617 - (36%) Gaps:170/617 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GRVLSIGDGIARVYGLNNIQADEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTG 134
            |||.::...:.....::.....|:|... ..|.|..:.||.|...:.|:.....:..||.|.|||
  Fly    17 GRVFAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTG 81

  Fly   135 AIVDVPVGDELLGRVVDAL----------------------------------------GNAIDG 159
            ..:.|.:|..::|.:.|.:                                        |:.|.|
  Fly    82 KPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVASWEFNPLNVKVGSHITG 146

  Fly   160 ---------------KGAINTKDRFRVGIKAPG-------------------------------- 177
                           |..:|.:.:..|...||.                                
  Fly   147 GDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEFDGEITKHTMLQVWPVRQP 211

  Fly   178 --IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKK 240
              :..::....|:.||.:.:|||.|..:|....|.|....||      |:|:|.....:..:   
  Fly   212 RPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGK------TVISQALSKYSNSD--- 267

  Fly   241 LYCIYVAIGQKRSTVAQIVK----------RLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAM 295
             ..|||..|::.:.::::::          .:|:| .|..:.:|:.|::.....:..:.|:|..:
  Fly   268 -VIIYVGCGERGNEMSEVLRDFPELSVEIDGVTES-IMKRTALVANTSNMPVAAREASIYTGITL 330

  Fly   296 GEYFRDKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAKMSPA 357
            .|||||.|.:..::.|..|:.|.|.|::|..|...|....||.   ||.:||   .|||.::. .
  Fly   331 SEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLGARLASFYERAGRVK-C 391

  Fly   358 MGG----GSLTALPVIETQAGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVSRV 416
            :|.    ||::.:..:....||.|..:.:..:.|.  |:|  |:.:|..:...|:||..:|.|:.
  Fly   392 LGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSINWLISYSKY 454

  Fly   417 GSA--------------AQTKAMKQVAGSMKLELAQYREVAAFAQF-GSDLDAATQQLLNRGVRL 466
            ..|              .:|| :|::       |.:..:::...|. |....|.|.::.....:|
  Fly   455 MRALDDFYDKNFPEFVPLRTK-VKEI-------LQEEEDLSEIVQLVGKASLAETDKITLEVAKL 511

  Fly   467 --TELLKQGQYVPMAIEDQVAVIYCGV---RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIA 526
              .:.|:|..|   :..|:....|..|   |..:|..|.|      :..::....||..:...:.
  Fly   512 LKDDFLQQNSY---SSYDRFCPFYKTVGMLRNIIDFYDMA------RHSVESTAQSENKITWNVI 567

  Fly   527 KD---GAISEASDAKLKDIV----AKFMSTFQ 551
            ::   ..:.:.|..|.||.|    ||..:.|:
  Fly   568 REAMGNIMYQLSSMKFKDPVKDGEAKIKADFE 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blwNP_726243.1 PRK09281 46..552 CDD:236448 124/617 (20%)
ATP-synt_ab_N 68..134 CDD:280947 15/63 (24%)
F1_ATPase_alpha 136..417 CDD:238552 77/388 (20%)
ATP-synt_ab_C 426..520 CDD:278722 19/99 (19%)
Vha68-2NP_001246015.1 V-ATPase_V1_A 16..606 CDD:273411 124/617 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454780
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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