DRSC/TRiP Functional Genomics Resources

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Protein Alignment blw and Vha55

DIOPT Version :9

Sequence 1:NP_726243.1 Gene:blw / 37617 FlyBaseID:FBgn0011211 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001163597.1 Gene:Vha55 / 41550 FlyBaseID:FBgn0005671 Length:490 Species:Drosophila melanogaster


Alignment Length:474 Identity:110/474 - (23%)
Similarity:188/474 - (39%) Gaps:91/474 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVF-GNDKLIKQGDIVKRTGAIV 137
            |.:.||..|                   .|..|.:......|.|| |...:..:..:.:.||.|:
  Fly    53 LRLADGTVR-------------------SGQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDIL 98

  Fly   138 DVPVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVP 200
            ..||.:::||||.:..|..|| ||.....:.| :.|:...|.|  |:...|.:||||.|:|.:..
  Fly    99 RTPVSEDMLGRVFNGSGKPID-KGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAIDVMNS 161

  Fly   201 IGRGQRELIIGD-------------RQTGKTALAIDTIINQKRFNEAQDESKKLYCIYVAIGQKR 252
            |.|||:..|...             ||.|...|...::::        |.:.....::.|:|...
  Fly   162 IARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLD--------DHTDNFAIVFAAMGVNM 218

  Fly   253 STVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDK-GKHALIIYDDLSKQ 316
            .|.....:...::|:|....:....|:|....:.:.|.......|:...: .||.|:|..|:|..
  Fly   219 ETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSY 283

  Fly   317 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSAYIP 381
            |.|.|::|......|||..:||.::...:.:.|||.::...  .||:|.:|::.....|::..||
  Fly   284 AEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--NGSITQIPILTMPNDDITHPIP 346

  Fly   382 TNVISITDGQIFLETELFYKGIRPAINVGLSVSR-----VGSAAQTKAMKQVAGSMKLELAQYRE 441
            .....||:|||:::.:|..:.|.|.:||..|:||     :|.....|....|:..:         
  Fly   347 DLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSDVSNQL--------- 402

  Fly   442 VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKF 506
            .|.:| .|.|:.|....:....:...:||    |:..                        :|||
  Fly   403 YACYA-IGKDVQAMKAVVGEEALTPDDLL----YLEF------------------------LTKF 438

  Fly   507 EKEFLQHIKTSEQALLDTI 525
            ||.|:.......:.:.:::
  Fly   439 EKNFISQGNYENRTVFESL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blwNP_726243.1 PRK09281 46..552 CDD:236448 110/474 (23%)
ATP-synt_ab_N 68..134 CDD:280947 10/60 (17%)
F1_ATPase_alpha 136..417 CDD:238552 81/301 (27%)
ATP-synt_ab_C 426..520 CDD:278722 15/93 (16%)
Vha55NP_001163597.1 V-ATPase_V1_B 25..488 CDD:273410 110/474 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454783
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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