DRSC/TRiP Functional Genomics Resources

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Protein Alignment blw and Vha55

DIOPT Version :10

Sequence 1:NP_726243.1 Gene:blw / 37617 FlyBaseID:FBgn0011211 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_476908.1 Gene:Vha55 / 41550 FlyBaseID:FBgn0005671 Length:490 Species:Drosophila melanogaster


Alignment Length:474 Identity:110/474 - (23%)
Similarity:188/474 - (39%) Gaps:91/474 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVF-GNDKLIKQGDIVKRTGAIV 137
            |.:.||..|                   .|..|.:......|.|| |...:..:..:.:.||.|:
  Fly    53 LRLADGTVR-------------------SGQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDIL 98

  Fly   138 DVPVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVP 200
            ..||.:::||||.:..|..|| ||.....:.| :.|:...|.|  |:...|.:||||.|:|.:..
  Fly    99 RTPVSEDMLGRVFNGSGKPID-KGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAIDVMNS 161

  Fly   201 IGRGQRELIIGD-------------RQTGKTALAIDTIINQKRFNEAQDESKKLYCIYVAIGQKR 252
            |.|||:..|...             ||.|...|...::::        |.:.....::.|:|...
  Fly   162 IARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLD--------DHTDNFAIVFAAMGVNM 218

  Fly   253 STVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDK-GKHALIIYDDLSKQ 316
            .|.....:...::|:|....:....|:|....:.:.|.......|:...: .||.|:|..|:|..
  Fly   219 ETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSY 283

  Fly   317 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSAYIP 381
            |.|.|::|......|||..:||.::...:.:.|||.::...  .||:|.:|::.....|::..||
  Fly   284 AEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--NGSITQIPILTMPNDDITHPIP 346

  Fly   382 TNVISITDGQIFLETELFYKGIRPAINVGLSVSR-----VGSAAQTKAMKQVAGSMKLELAQYRE 441
            .....||:|||:::.:|..:.|.|.:||..|:||     :|.....|....|:..:         
  Fly   347 DLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSDVSNQL--------- 402

  Fly   442 VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKF 506
            .|.:| .|.|:.|....:....:...:||    |:..                        :|||
  Fly   403 YACYA-IGKDVQAMKAVVGEEALTPDDLL----YLEF------------------------LTKF 438

  Fly   507 EKEFLQHIKTSEQALLDTI 525
            ||.|:.......:.:.:::
  Fly   439 EKNFISQGNYENRTVFESL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blwNP_726243.1 AtpA 44..551 CDD:439826 110/474 (23%)
Vha55NP_476908.1 V-ATPase_V1_B 25..488 CDD:273410 110/474 (23%)

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