DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13527 and psh

DIOPT Version :10

Sequence 1:NP_001286744.1 Gene:CG13527 / 37615 FlyBaseID:FBgn0034776 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:249 Identity:57/249 - (22%)
Similarity:95/249 - (38%) Gaps:67/249 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FGDNHYCGGGLLSNQWVITAAHCVMGQSKIMYKARWLLVVAGSP-HRLRYTPGKSVCSPVSSLYV 119
            ||.:..|||.|:::::|:||||||...:......|...|...:| |..:....:||  .:...||
  Fly   166 FGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPDHSYQDIVIRSV--KIHPQYV 228

  Fly   120 PKNFTMHNTFNMALMKLQEKMPSNDP-RIGFLHLPKEAPKIGIRHTVLGWGRM------------ 171
            ...:.     ::|:::|:..:...|. |...||.....|....:..|.|||.:            
  Fly   229 GNKYN-----DIAILELERDVVETDNIRPACLHTDATDPPSNSKFFVAGWGVLNVTTRARSKILL 288

  Fly   172 ---------------YFGGPLAVHIYQVDVVLMDNAVCKTYFRHYGDGMMCAGNNNWTIDAEPCS 221
                           |...|.::.:.:..|:               |.::||.:.....||  |.
  Fly   289 RAGLELVPLDQCNISYAEQPGSIRLLKQGVI---------------DSLLCAIDQKLIADA--CK 336

  Fly   222 GDIGSPLL------SGK-VVVGIVAYPIGCGCTNIPSVYT------DVFSGLRW 262
            ||.|.||:      .|. .::|:::...|| .|..|.:||      |...|:.|
  Fly   337 GDSGGPLIHELNVEDGMYTIMGVISSGFGC-ATVTPGLYTRVSSYLDFIEGIVW 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13527NP_001286744.1 Tryp_SPc 43..266 CDD:238113 57/249 (23%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 55/245 (22%)
Blue background indicates that the domain is not in the aligned region.

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