DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and Cnga4

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_445948.2 Gene:Cnga4 / 85258 RGDID:619844 Length:575 Species:Rattus norvegicus


Alignment Length:470 Identity:197/470 - (41%)
Similarity:292/470 - (62%) Gaps:6/470 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 RTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCL 618
            :|......|.|.|||...|.||:|...|:|...:....:||..:::.|..|.::....:..||.|
  Rat     8 KTTESTPPAPTKARKWLPVLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVL 72

  Fly   619 DYLSDFLYLIDILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN-S 682
            ||.||.|||:||...|.||:||.|:|..|...:.:.|:.:..|.:|...|:|.|..|:.:|.: .
  Rat    73 DYTSDLLYLLDIGVRFHTGFLEQGILVVDKGMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIP 137

  Fly   683 ILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWV 747
            .||..|.:::.|.:...||||..|.|||.||...|:.|:.|:.|||.|||..:.:..|||...||
  Rat   138 TLRLNRFLRVPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWV 202

  Fly   748 YHDSESAD---VVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVAN 809
            |.|.....   :.:|||.|:|:.||.|||:||.|.|..:.||:|::...|..:|.|||::|.:::
  Rat   203 YPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPLPDREEEYLFMVGDFLLAVMGFATIMGSMSS 267

  Fly   810 IVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKA 874
            ::.:::.|...|......||.||:::.|...|:.:||.|:.:|.:.:|.::|...:..||::|:|
  Rat   268 VIYNMNTADAAFYPDHALVKKYMKLQHVNKRLERRVIDWYQHLQINKKMTNEVAILQHLPERLRA 332

  Fly   875 EIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVA 939
            |:|::|||.||.||:||||.||..|.||||:|:|..:|||:|:||||::|:||||:..|:|.|||
  Rat   333 EVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVA 397

  Fly   940 DNGKTVMASLKAGSYFGEISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARV 1002
            |:|.|..|.|.||.|||||||:|:  ..:||||||:::|:||||||.|||:|:.:||.|||.|:.
  Rat   398 DDGVTQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQA 462

  Fly  1003 RLESIAVKRLEKYKK 1017
            .:|....:.|.|..|
  Rat   463 VMEEKGREILLKMNK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 88/241 (37%)
CAP_ED 890..1004 CDD:237999 69/115 (60%)
DUF4655 1084..>1154 CDD:317882
Cnga4NP_445948.2 Ion_trans 58..273 CDD:278921 82/214 (38%)
P-loop_NTPase 116..>174 CDD:304359 21/57 (37%)
IQ-type. /evidence=ECO:0000250 292..302 2/9 (22%)
Crp 342..>519 CDD:223736 77/136 (57%)
CAP_ED 348..464 CDD:237999 69/115 (60%)
CLZ 464..535 CDD:293134 4/14 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..575
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.780

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