DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGC10

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001184885.1 Gene:CNGC10 / 838832 AraportID:AT1G01340 Length:711 Species:Arabidopsis thaliana


Alignment Length:671 Identity:158/671 - (23%)
Similarity:265/671 - (39%) Gaps:159/671 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 PHHQKP--RRTASQRIRAATAARKLHFVFDPAGRLCYYW------SMVVSMA----FLYNFWVII 599
            |.|:.|  :.|:|       ..||  .:.:|.......|      :.||::|    |.|...|..
plant    50 PSHKDPDHKETSS-------VTRK--NIINPQDSFLQNWNKIFLFACVVALAIDPLFFYIPIVDS 105

  Fly   600 YRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRTGYLED-------GVLQTDALKLRTHYMN 657
            .|......::..||. ..|..|.|..|:|.|:|.|||.|:..       |.|..||..:...|: 
plant   106 ARHCLTLDSKLEIAA-SLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYL- 168

  Fly   658 STIFYIDCLCLLPL---------------------DFLYLSIGFNSILRSFRLVKIYRFWAFMDR 701
            |:.|.||.|.:|||                     |:|..||....:.|..|:..:|        
plant   169 SSYFIIDLLSILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLY-------- 225

  Fly   702 TERHTNYPNLFRSTA-------LIHYLLVIFHWNGCLYHII-------------HKNNGFG---- 742
            || .|....:...||       |..|:|. .|..|.|:::|             .|..|..    
plant   226 TE-VTRTSGIVTETAWAGAAWNLSLYMLA-SHVFGALWYLISVEREDRCWQEACEKTKGCNMKFL 288

  Fly   743 --------SRNW----------------------VYHDS------ESADVVKQYLQSYYWCTLAL 771
                    |.|:                      ::.|:      ||.|..|::...::|....|
plant   289 YCENDRNVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNL 353

  Fly   772 TTIG-DLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMR 835
            :.:| :|...:..||.:|.|...:.||:|||.::|::...:.|.:...:|.:.:....:.:|..|
plant   354 SALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHR 418

  Fly   836 RVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLC 900
            .:|..|:.::.::..|.|...:..:||..:..||..|:.:|..::.||.||:|.:|:..:...|.
plant   419 MLPEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLD 483

  Fly   901 ELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTV----MASLKAGSYFGEISI- 960
            .:..||||||::...|:.|:|:...||..|.||||.....||...    ..:|||..:.||..: 
plant   484 AVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLP 548

  Fly   961 --LNMGTAGN--RRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAPLE 1021
              |:..::.:  ..|.:|:::...:.|.|:.:|:..|..::.    ||.|   |:|:       .
plant   549 WALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFR----RLHS---KQLQ-------H 599

  Fly  1022 KVKYFNVVAMGRCQSTPGLVESCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQQPHRQE 1086
            ..::::|  ..|..|...:..:..|....::        |.||......|::. .|||.:.|...
plant   600 TFRFYSV--QWRTWSVSFIQAAWRRYCRRKL--------AKSLRDEEDRLREA-LASQDKEHNAA 653

  Fly  1087 STQTSSQTHGYSPRSYADRLA 1107
            :..:|....|   ..||.|.|
plant   654 TVSSSLSLGG---ALYASRFA 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 77/336 (23%)
CAP_ED 890..1004 CDD:237999 32/122 (26%)
DUF4655 1084..>1154 CDD:317882 6/24 (25%)
CNGC10NP_001184885.1 PLN03192 46..>491 CDD:215625 107/461 (23%)
CAP_ED 473..604 CDD:237999 37/144 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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