DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGC5

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_200602.2 Gene:CNGC5 / 835905 AraportID:AT5G57940 Length:717 Species:Arabidopsis thaliana


Alignment Length:644 Identity:140/644 - (21%)
Similarity:252/644 - (39%) Gaps:143/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 VFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINR--------RTIAIW-FCLDYLSDFLYL 627
            :|||..:...|.:.:...:.:.:.:|..:.|....||.        |.:||. ..|....|..||
plant    88 IFDPQDKFLLYCNKLFVASCILSVFVDPFFFYLPVINAESKCLGIDRKLAITASTLRTFIDVFYL 152

  Fly   628 IDILFHFRTGYLED-------GVLQTDALKLRTHYMNSTIFYIDCLCLLPLD------FLYLSIG 679
            ..:....||.|:..       |.|..|..::...|:... |.||.|.:|||.      ||..|.|
plant   153 AHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRW-FIIDFLSVLPLPQIVVWRFLQSSNG 216

  Fly   680 FNSILRSFRLVKIY------RFWAFMDRTERHTNYPNLFRSTA---LIHYLLVIF---HWNGCLY 732
            .:.:.....|:.|.      ||...:..|........:|..||   ..:|||:..   |..|..:
plant   217 SDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFW 281

  Fly   733 HI--IHKNNG------------------FGSRN------W------------------------- 746
            ::  :.:|:.                  .|::|      |                         
plant   282 YLLALERNDACWQEACIDAGNCSTDFLYCGNQNMDGYAVWNRAKESVLKSKCRADLDDNNPPFDF 346

  Fly   747 -VYHDSESADVVK------QYLQSYYWCTLALTTIGD-LPKPRSKGEYVFVILQLLFGLMLFATV 803
             :|..:.|:.:|.      :|....:|....|:|:|. |.......|.:|.|...:.||:|||.:
plant   347 GIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQGLETSTYPMEIIFSISLAISGLILFALL 411

  Fly   804 LGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCL 868
            :|::...:.|::...:|.:.|....:.:|..|.:|..|:.:|.::..|.||..:..|||..|..|
plant   412 IGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNL 476

  Fly   869 PDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRG 933
            |..|:.:|..::.|..::||.:|::.:...|..:.:||:|.||:...|:.|:|:...||..:.||
plant   477 PKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRG 541

  Fly   934 RLQ-VVADNGKTVM---ASLKAGSYFGE---------ISILNMGTAGNRRTASVRSVGYSDLFVL 985
            ||: |..|.|::..   :.||.|.:.||         .|.:|:.::    |.:|:::...:.|.|
plant   542 RLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSS----TRTVKALTEVEAFAL 602

  Fly   986 SKKDMWDVLKEYPAARVRLESIAVKRLEKY---------------------KKAPLEKVKYFNVV 1029
            :.:::..|..::.    ||.|..|:...::                     |:..:|:.:   ..
plant   603 TSEELKFVASQFR----RLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAE---AE 660

  Fly  1030 AMGRCQSTPGLVESCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQQPHRQEST 1088
            |.....||.|...|.|...|...:    .|.|...:|.::..:.:.....|:|...:.|
plant   661 AAAVSSSTAGPSYSIGAAFLATKF----AANALRTIHRNRNTKIRDLVKLQKPPEPDFT 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 66/330 (20%)
CAP_ED 890..1004 CDD:237999 31/126 (25%)
DUF4655 1084..>1154 CDD:317882 1/5 (20%)
CNGC5NP_200602.2 PLN03192 84..>550 CDD:215625 107/462 (23%)
CAP_ED 498..629 CDD:237999 35/138 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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