DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and GORK

DIOPT Version :10

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001332118.1 Gene:GORK / 833728 AraportID:AT5G37500 Length:842 Species:Arabidopsis thaliana


Alignment Length:543 Identity:118/543 - (21%)
Similarity:241/543 - (44%) Gaps:84/543 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   571 FVFDPAGRLCYYWSMVVSMAFLYN--FWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFH 633
            ::..|..|....|.|.:.:..:|:  |..:.:.| |:.:..|.    |.||.:....:|:||:..
plant    56 YIIHPKNRWYKAWEMFILVWAIYSSLFTPMEFGF-FRGLPERL----FVLDIVGQIAFLVDIVLQ 115

  Fly   634 FRTGYLEDGVLQT--DALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNSILRS---FRLVKIY 693
            |...|.:....:|  ...::...|:.|. |.:|.:...|.|.:|.:.|.:.::|.   .||.::.
plant   116 FFVAYRDTQTYRTVYKPTRIAFRYLKSH-FLMDFIGCFPWDLIYKASGKHELVRYLLWIRLFRVR 179

  Fly   694 RFWAFMDRTERHTNYPNLFRSTALIHYLLV---IFHWNGCLYHII-----HKNNGFGSRNWV--- 747
            :...|..|.|:.|....||  |.::..|.|   ..|...|:::.:     .:|.|:   .|:   
plant   180 KVVEFFQRLEKDTRINYLF--TRILKLLFVEVYCTHTAACIFYYLATTLPPENEGY---TWIGSL 239

  Fly   748 ------YHDSESADVVKQYLQSYYWCTLALTTI--GDLPKPRSKGEYVFVILQLLFGLMLFATVL 804
                  |.:....|:.|:|..:.|:..:.:.|:  ||:.....: |.:||::.:.|.::|.|.::
plant   240 KLGDYSYENFREIDLWKRYTTALYFAIVTMATVGYGDIHAVNLR-EMIFVMIYVSFDMVLGAYLI 303

  Fly   805 GHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKV-----IKWFDYLWLTQKCSDEERA 864
            |::..::...|...: |:.|::.:.::|..:::...|:.::     :::..:...|....|    
plant   304 GNITALIVKGSNTER-FRDKMNDLISFMNRKKLGRDLRSQITGHVRLQYDSHYTDTVMLQD---- 363

  Fly   865 VSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYI 929
               :|..::|:||..::|..:|:|.:|:.....|:.::|:||....|.||:.|..:|.|...:|.
plant   364 ---IPASIRAKIAQLLYLPYIKKVPLFKGCSTEFINQIVIRLHEEYFLPGEVITEQGNVVDHLYF 425

  Fly   930 VNRGRLQVV---ADNGKTVMASLKAGSYFGEISIL-NMGTAGNRRTASVRSVGYSDLFVLSKKDM 990
            |..|.|:.:   .|..:..:..|...:.||:|||: |:.     :..:||......|..|.|:..
plant   426 VCEGLLEALVTKTDGSEESVTLLGPHTSFGDISIICNIS-----QPFTVRVCELCHLLRLDKQSF 485

  Fly   991 WDVLKEY-PAARVRLESI--------AVKRLEK-------YKKAPLE-KVK-------YFNVVAM 1031
            .::|:.| ...|..|.:|        .:|:||.       .::|.|. ||.       ::.:.::
plant   486 SNILEIYFHDGRTILNNIMEEKESNDRIKKLESDIVIHIGKQEAELALKVNSAAFQGDFYQLKSL 550

  Fly  1032 GRCQSTPGLVESCGRTSLEEMWL 1054
            .|..:.|...:..||:.|..:.|
plant   551 IRSGADPNKTDYDGRSPLVRLSL 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..820 CDD:459842 57/264 (22%)
CAP_ED 890..1004 CDD:237999 31/118 (26%)
GORKNP_001332118.1 PLN03192 55..837 CDD:215625 118/543 (22%)
ANK repeat 563..616 CDD:293786 4/11 (36%)
ANK repeat 618..649 CDD:293786
ANK repeat 682..707 CDD:293786
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.